Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 seq17 91.5 1e-13 >seq12 Length=1122692 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25190 AAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAA 25249 ||||| || || || ||| | |||||| |||||||||| || || || ||||| | Sbjct 917153 AAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAAC 917094 Query 25250 GTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTAC 25309 || ||| |||||| || || ||||| || ||||| || ||||| || | |||| | Sbjct 917093 GTGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTTC 917034 Query 25310 GGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCC 25369 | ||| ||||| | ||||| | |||| | || |||||||| || ||||||||||| Sbjct 917033 GCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATCA 916974 Query 25370 ACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| | || || ||||| | ||| |||| || Sbjct 916973 ACCTTGCACTTGGTGTTGCGTTTGCGAGGCGG 916942 >seq17 Length=937610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 25209 CGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCG 25268 ||||||| |||||||||| | || |||||||| | || || ||||| | Sbjct 351517 CGATCACCCTCGAAGTCGAGTCTTCGGACACTATCGACAACGTCAAGGCGAAAATCCAAG 351458 Query 25269 ATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAG 25328 | |||||||| || ||||| |||||||| || | || | || ||| |||||| | |||| Sbjct 351457 ACAAAGAGGGCATCCCGCCGGATCAGCAGCGATTGATCTTCGCCGGAAAACAATTAGAAG 351398 Query 25329 ATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||| ||| | | ||| || || |||||||||||||||||| | || || || || Sbjct 351397 ATGGCCGAACTTTAGCCGACTATAACATTCAAAAAGAATCCACCTTGCACTTGGTCTT 351340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094283162720