Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq16 174 2e-37 seq14 134 2e-25 seq1 127 3e-23 seq19 93.3 6e-13 seq17 87.8 3e-11 >seq16 Length=955652 Score = 174 bits (192), Expect = 2e-37 Identities = 361/525 (69%), Gaps = 13/525 (2%) Strand=Plus/Plus Query 1455792 AAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGAC-ACGG 1455849 || || || ||||| |||||||||||| |||||| | || | | || ||| || | Sbjct 697491 AAGAAAGCGGAGGCGAGCTTTTGGACCGCGGAGGAGATTGATTT-GACGTACGATTACAG 697549 Query 1455850 TCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTT 1455909 | ||| | || ||| ||| |||||| ||||| |||| |||||| | || |||| Sbjct 697550 AG-ATTGGATCACGTTGAACGAGAACGAGCAACATTTTATCACGCACGTTTTGGCGTTTT 697608 Query 1455910 TTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTC 1455969 |||||||| || || ||||| ||||| | || || |||||||||||| | Sbjct 697609 -TCGCCGCCTCGGACGGTATCGTCTTGGAGAATTTATGCGTGCGGTTTATGAAAGAGATT 697667 Query 1455970 CAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCT 1456029 || | || ||||| | |||||||| ||| ||| ||||||| || || ||| Sbjct 697668 CAGGTTCCCGAGGCGAGAGCGTTTTACGCGTTTCAGCAATCCATCGAGAATATTCACAGC 697727 Query 1456030 GAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTC 1456089 ||||| ||| || | || | || || ||||| || ||||| | ||||| | | Sbjct 697728 GAAACGTACGCGTTGTTGTTAGAGACGTACGTGAAAGACCCAATTCAGAAGAGAAATTTG 697787 Query 1456090 TTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149 ||||| || || | ||| | || | |||| || ||||| || ||||||||||| ||| Sbjct 697788 TTTCGAGCGATTCATACGATTCCAACCGTGAAAAAGAAGGCGGATTGGGCGATGAAATGG 697847 Query 1456150 ATCAA--CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGA 1456206 ||| | | | || ||| |||||||| || | ||||| || || |||| || Sbjct 697848 ATCGAGTCTTCGTCGG---CGA-GGTTTGCCGAACGTTTAGTCGGTTTCGCATGCGTGGA 697903 Query 1456207 GGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCAT 1456266 ||||| || ||| |||||||||||||||||||||||||| |||||| | || | || Sbjct 697904 AGGCATTTTCTTCAGCGGCAGTTTCTGCGCCATCTTTTGGCTAAAGAAGAGAGGATTGAT 697963 Query 1456267 GCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 | ||| || ||| |||||| || |||||||| ||||||| Sbjct 697964 GAAAGGT-TTGACGTTTTCCAACGAGTTGATCAGTCGAGACGAAG 698007 >seq14 Length=1037991 Score = 134 bits (148), Expect = 2e-25 Identities = 237/336 (71%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 1456447 AGGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGT-CGA 1456505 |||||||||| | || ||||| || |||| ||||||||| | ||||| |||| ||| Sbjct 66207 AGGTTTGCACAGAGATTTTGCGTGCTTGCTTTACACGATGTTGAACAACACGCCGGGCGA 66148 Query 1456506 CC-GACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564 || || || |||| | |||||| || || || ||||| |||||||| || Sbjct 66147 GGAGAAGTTGAGAA--AGATTGTTACCGAGGCGGTTGAAATTGAGAAGGAGTTTGTGTGC 66090 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 || || ||||| |||||| |||||||||||||| | | ||| | | ||||| | Sbjct 66089 GACGCGTTGCCGTGCGCGCTCGTCGGCATGAACGCCGAC-ATGATGAGAGATTACATCG- 66032 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGC--TGCGGAGAAGCACTACCGGACGG 1456682 | | || ||||| | | ||||| || ||||||| |||| || || || || || | Sbjct 66031 AGTACGTTGCCGATCACTTGCTCTCGCAGCTCGGCTTTGCGAAGGAGTACGAC---ACCG 65975 Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGC 1456742 | ||||||||| |||||||| || || || | | |||||||| ||||| || ||| Sbjct 65974 CGAACCCGTTCGACTGGATGGAATTAATTTCTTTGCAAGGCAAGACGAACTTCTTTGAGA 65915 Query 1456743 GCCGCGT-GGCGAGTACGCCAAGGCCGGCGTCACCG 1456777 || || ||||||||| ||| | |||||||||| Sbjct 65914 AACGTGTCGGCGAGTACCAAAAGTCTGGCGTCACCG 65879 >seq1 Length=1352724 Score = 127 bits (140), Expect = 3e-23 Identities = 186/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 ||| |||| || | || || ||||| |||||||| ||||| || ||||||||| || Sbjct 26287 GCGTCGCCAACCTTGTTCAACGCCGGTACGCCGCGACCGCAACTCTCCTCGTGCTTTTTG 26228 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | |||||||| || || || || || ||||| |||||| | ||| | |||||| | Sbjct 26227 ATTTGCATGAAGGAAGACTCCATTGAAGGTATCTACGACACGTTGAAGGAATGCGCGTGC 26168 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 || |||||| | |||||||| || ||||| | ||| | | |||||| | | Sbjct 26167 ATTTCCAAGTCCGCCGGCGGTATTGGTTTGTCTATTCACGACATCCGCGCCACTTCGTCG 26108 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | ||||| ||||| || ||||| | | || ||||||||||| || ||| Sbjct 26107 TACATTAGAGGCACAAACGGTACCTCGAACGGTATCATTCCGATGCTTCGCGTGTTCAAC 26048 Query 260159 GACACGGCGCGCTACGTCGACCA 260181 ||||||||| | ||||| ||||| Sbjct 26047 GACACGGCGAGGTACGTGGACCA 26025 Score = 113 bits (124), Expect = 6e-19 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||||| |||||||||||||| |||||| ||||| |||||||||||| | ||| || Sbjct 26023 GGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATTTACCTCGAACCGTGGCACTCTGACATC 25964 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||||||| ||| | |||||||||||| || || |||| || | || || Sbjct 25963 TTCGACTGGCTCGACTTGCGAAAGAACCACGGGAA------GGAAGAAGCGAGAGCTCGT 25910 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATG 261946 || | |||||||| |||||||| ||| |||| ||| Sbjct 25909 GACTTGTTTTACGGTTTGTGGACGAACGATTTGTTCATG 25871 Score = 93.3 bits (102), Expect = 6e-13 Identities = 163/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| | ||||| |||||||| |||| |||| ||| |||| | Sbjct 890997 ATCTACAAGGTCTTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCCTCCAAGGCG 891050 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || |||||||||| |||| |||| || || |||| Sbjct 891051 ATGAGCATCATGAACTCCTTCATCAACGACATCTTCGAAAAGATCGCGACTGAAGCCGCC 891110 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGC---GAGATCCAGACCGCC 725087 |||| || | ||||||| || ||| || ||| | || ||||| || || Sbjct 891111 AAGTTGGCCCGATACAACAAG---AAGCCGACCGTGACGTCCAGAGAAATCCAAACGTCC 891167 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||||| ||| || ||| |||||| ||||||||||||||| || |||| Sbjct 891168 GTTCGATTGATCTTGCCGGGTGAATTGGCCAAGCACGCCGTCTCCGAAGGGACCA 891222 >seq19 Length=1019276 Score = 93.3 bits (102), Expect = 6e-13 Identities = 163/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| | ||||| |||||||| |||| |||| ||| |||| | Sbjct 477057 ATCTACAAGGTCTTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCCTCCAAGGCG 477004 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || |||||||||| |||| |||| || || |||| Sbjct 477003 ATGAGCATCATGAACTCCTTCATCAACGACATCTTCGAAAAGATCGCGACTGAAGCCGCG 476944 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGC---GAGATCCAGACCGCC 725087 |||| || | ||||||| || ||| || ||| | || ||||| || || Sbjct 476943 AAATTGGCCCGATACAACAAG---AAGCCGACCGTGACGTCCAGAGAAATCCAAACGTCC 476887 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||||| ||| || ||| |||||| ||||||||||||||| || |||| Sbjct 476886 GTTCGATTGATCTTGCCGGGTGAATTGGCCAAGCACGCCGTCTCCGAAGGGACCA 476832 >seq17 Length=937610 Score = 87.8 bits (96), Expect = 3e-11 Identities = 162/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| | ||||| |||||||| |||| |||| ||| |||| | Sbjct 270550 ATCTACAAGGTCTTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCCTCCAAGGCG 270497 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || |||||||||| |||| |||| || || |||| Sbjct 270496 ATGAGCATCATGAACTCCTTCATCAACGACATCTTCGAAAAGATCGCGACGGAAGCCGCC 270437 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGC---GAGATCCAGACCGCC 725087 ||||| | | ||||||| || ||| || ||| || || ||||| || || Sbjct 270436 AAGTTGGCGAGATACAACAAG---AAGCCGACCGTGACGAGCAGAGAAATCCAAACGTCC 270380 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||||| ||| || ||| |||||| ||||||||| || || || |||| Sbjct 270379 GTGAGATTGATCTTGCCGGGTGAATTGGCCAAGCACGCCGTGTCGGAAGGGACCA 270325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809174511402