Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq16 149 6e-31 seq12 125 6e-24 seq7 125 6e-24 >seq16 Length=955652 Score = 149 bits (164), Expect = 6e-31 Identities = 178/238 (75%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 35501 TCTTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559 ||||| || || || ||||| | ||||||||| || |||||| |||||| || ||||| Sbjct 707276 TCTTTCTTCGCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTT 707335 Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619 |||||||||||| |||| |||| || | ||||||||| || || ||||| |||||||| Sbjct 707336 GTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTG 707395 Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGC 35678 |||| || | | |||||||| |||||| ||| | |||| | | |||||| Sbjct 707396 ATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCGG 707454 Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || |||| |||||| ||||| || |||||||| || || || || ||||| Sbjct 707455 AAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || |||||| |||||| || ||||||||||||||||| |||| |||| Sbjct 707528 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707587 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || | ||||||||| || || ||||| |||||||| |||| || | | |||||||| Sbjct 707588 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707647 Query 35644 CATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||| | |||| | | |||||| || || || |||| |||||| | Sbjct 707648 TTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGG 707706 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || |||||||| || || || || ||||| Sbjct 707707 TTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || |||||| |||||| || ||||||||||||||||| |||| |||| Sbjct 707756 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707815 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || | ||||||||| || || ||||| |||||||| |||| || | | |||||||| Sbjct 707816 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707875 Query 35644 CATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||| | |||| | | |||||| || || || |||| |||||| | Sbjct 707876 TTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGG 707934 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || |||||||| || || || || ||||| Sbjct 707935 TTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || |||||| |||||| || ||||||||||||||||| |||| |||| Sbjct 707984 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 708043 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAA 35630 || | ||||||||| || || ||||| |||||||| |||| |||| Sbjct 708044 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGAA 708090 >seq12 Length=1122692 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || || | ||||||||| || || || || ||||| ||||||||||| || Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCG 917001 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | |||| || | ||| ||||| || || ||||| ||||||||||||| ||| Sbjct 917002 AGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGA 917061 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| | ||| ||| |||| |||| | | |||||| || || || Sbjct 917062 ATGCCCTCCTTGT-CTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGAC 917120 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 || | |||||| ||||| || ||||||||||| Sbjct 917121 TTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq7 Length=519835 Score = 125 bits (138), Expect = 6e-24 Identities = 144/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 |||||||| |||||||| ||| ||||||||||| ||||| ||||| || || |||| Sbjct 260374 AACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCT 260433 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || | ||| || || || || ||||||||||||||||| | ||| | || |||||||| Sbjct 260434 TCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 260493 Query 35645 ATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 ||| ||| || | |||| | | ||||| |||||||| |||| |||||||| Sbjct 260494 TGGAT-TTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGT 260552 Query 35704 TTTACCCGTCA 35714 ||| ||||||| Sbjct 260553 TTTGCCCGTCA 260563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793481666680