Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq16 143 3e-29 seq7 125 7e-24 seq12 123 3e-23 seq17 105 7e-18 >seq16 Length=955652 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CC 134545 || ||||| | |||||||| | ||| | ||| || ||||| || |||||||| ||| || Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 |||| | || ||| || | ||| || || || |||||||| ||||||||||| ||||| Sbjct 707574 AACGTTCTGCC-GTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707632 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | |||||||| || || || Sbjct 707633 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 707692 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || ||||| || ||||| |||||||| Sbjct 707693 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CC 134545 || ||||| | |||||||| | ||| | ||| || ||||| || |||||||| ||| || Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 |||| | || ||| || | ||| || || || |||||||| ||||||||||| ||||| Sbjct 707802 AACGTTCTGCC-GTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707860 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | |||||||| || || || Sbjct 707861 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 707920 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || ||||| || ||||| |||||||| Sbjct 707921 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CCAACGGTGTGAGA 134557 |||||||| | ||| | ||| || ||||| || |||||||| ||| |||||| | || Sbjct 707298 CGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCC- 707356 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || | ||| || || || |||||||| ||||||||||| ||||| || ||||| || Sbjct 707357 GTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTT 707416 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 ||||| || || ||||| ||| | |||||||| || || || || | || || Sbjct 707417 GTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGAT 707476 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || || ||||| || ||||| |||||||| Sbjct 707477 GGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 89.7 bits (98), Expect = 5e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG-CC 134545 || ||||| | |||||||| | ||| | ||| || ||||| || |||||||| ||| || Sbjct 707970 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 708029 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 |||| | || ||| || | ||| || || || |||||||| ||||||||||| ||||| Sbjct 708030 AACGTTCTGCC-GTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 708088 Query 134606 TATGCCTTCTTTT 134618 || ||| |||| Sbjct 708089 AATTCCTGTTTTT 708101 >seq7 Length=519835 Score = 125 bits (138), Expect = 7e-24 Identities = 171/235 (73%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 || ||||| || || ||||| | ||||| |||||| || ||||||||||| || | |||| Sbjct 260359 CCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCC 260418 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | |||||| || || || ||||| |||||||| || || || Sbjct 260419 AA-AGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGG 260477 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| ||||| ||||| ||| | ||||| || |||||||| Sbjct 260478 GATGCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCAC 260537 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTT-TAACGAAAATTTGCATTTTGTT 134719 || | || || ||||| || || | ||| ||| ||| || |||||||| Sbjct 260538 TTCCAAGGTGATCGTTTTGCCCGTCACTTTTTATAAAGAACATCGTGATTTTGTT 260592 >seq12 Length=1122692 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||||||| | ||| | || ||||| ||||| |||||||| || | | || | Sbjct 916954 CGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCG 917013 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | |||||| || || |||||||| |||||||| || ||||| ||||| || || Sbjct 917014 TCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGAATGCCCTCCTTG 917073 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||||||||| ||| || ||| | ||||| || || || || ||||| || ||| Sbjct 917074 TCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGACTTCGAGCGTGATG 917133 Query 134679 GTTTTACCGGTTAAAGTTTTA 134699 ||||| || || ||||||||| Sbjct 917134 GTTTTCCCAGTCAAAGTTTTA 917154 >seq17 Length=937610 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 ||||| || | ||| | |||||||| ||||||||||| |||||| | | || | Sbjct 351337 CGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCTAAAGTTCGGCCA 351396 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | ||||| || || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct 351397 TCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGGGATGCCCTCTTTG 351456 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| ||||| ||||| ||| | ||||| || || || || ||||| || || Sbjct 351457 TCTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGACTTCGAGGGTGATC 351516 Query 134679 GTTTTACCGGT 134689 || || || || Sbjct 351517 GTCTTGCCCGT 351527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398267332920