Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq21 810 0.0 >seq21 Length=72700 Score = 810 bits (898), Expect = 0.0 Identities = 768/978 (79%), Gaps = 2/978 (0%) Strand=Plus/Minus Query 174468 TTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTA 174527 |||||||| ||| |||| ||||| | || ||| | ||| |||| ||||||||||| || Sbjct 54066 TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTA 54007 Query 174528 ATGATTCCTACATTGTTAGCCGCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCC 174586 ||||| |||||||| ||| | || ||| | ||| ||||| | || ||| | | ||||| Sbjct 54006 ATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCC 53948 Query 174587 CCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAA 174646 |||||||||||||| || || ||||| |||||| |||| ||||| ||||| |||||||| Sbjct 53947 TCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAA 53888 Query 174647 CATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAAT 174706 ||||||||||||||| || ||||||| |||||||| ||||| || |||||||||||||| Sbjct 53887 CATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAAT 53828 Query 174707 CTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGT 174766 |||||||||||| ||||| || || ||||| ||||||||||| |||| ||| || | || Sbjct 53827 CTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGT 53768 Query 174767 CTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCG 174826 | |||||| | || || | | | || ||||| ||||||||||| || || | || Sbjct 53767 ATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCG 53708 Query 174827 TTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGC 174886 |||||| ||| | ||||||||| |||||| |||||||| || || ||||| || | || Sbjct 53707 TTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGC 53648 Query 174887 AGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTAT 174946 ||||||| | | || || |||| || || || ||||| |||| ||||| | ||||| Sbjct 53647 AGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTAT 53588 Query 174947 CTCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCC 175006 |||||||| ||||||| |||| | || ||||| || || || |||||| | |||||||| Sbjct 53587 TTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 53528 Query 175007 CTTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGG 175066 ||||||||| | ||||| || ||||| |||||||||||| | ||||| || ||||| || Sbjct 53527 ATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGG 53468 Query 175067 TTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGG 175126 |||||| || || ||||||||| ||||||| || ||||| | || ||| ||| || Sbjct 53467 TTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGG 53408 Query 175127 TTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGG 175186 ||||||||||| |||||||||||||| || ||||| || || || || || |||||||| Sbjct 53407 ATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGG 53348 Query 175187 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGC 175246 ||| | |||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct 53347 ACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGC 53288 Query 175247 CGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAA 175306 ||||| || |||| ||||||||||| || |||||| |||| || ||||| ||||| Sbjct 53287 TATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAA 53228 Query 175307 CCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACAC 175366 ||| || || ||||||||||||||||| || | || | | || | || | ||||| Sbjct 53227 CCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACAC 53168 Query 175367 CTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGC 175426 ||||| ||| || | ||| | ||| ||||| |||||||||||||| ||| | || || Sbjct 53167 ATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGC 53108 Query 175427 ACACAACTTCCCACTAGA 175444 |||||||||||||| || Sbjct 53107 TCACAACTTCCCACTTGA 53090 Score = 522 bits (578), Expect = 4e-143 Identities = 703/967 (73%), Gaps = 10/967 (1%) Strand=Plus/Minus Query 175899 GGCTGGTCTGGATTACTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGCTGGCTTAC 175957 || ||||||||| | || || |||||| ||| || |||| |||| || |||||||| Sbjct 62434 GGTTGGTCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTAC 62376 Query 175958 TGGCACAACTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGA-GG 176016 ||| ||||| || || || |||||||| || ||| | || ||| || ||||| || Sbjct 62375 TGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGG 62316 Query 176017 GTGCTAACTTTCTCACAGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTC 176076 ||| |||||| ||||| | || || || || || | | || |||| || || |||| Sbjct 62315 GTG-TAACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTC 62257 Query 176077 TTCTACTTTGGGGTCCTGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGC 176136 |||| |||||||| || ||| | || || |||||| || ||| |||||||| || Sbjct 62256 TTCTCCTTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGAT 62197 Query 176137 TTTGGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGT 176196 | ||| | || || ||||| ||||| || || | | || ||||| ||||||||||| | Sbjct 62196 TATGGACATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAAT 62137 Query 176197 TTGAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTA 176256 ||||| | || | | || ||||| |||||||| ||||||||| | || | Sbjct 62136 TTGAAATTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAA 62077 Query 176257 TCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTG 176316 | ||||| ||||| ||| || ||| | |||||||| || ||||| |||||||||| Sbjct 62076 TTGCTGTGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTG 62017 Query 176317 CCCCCTCCTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTT-CTTC-AGGGTTTCCA 176374 | || || |||||||| || | ||| || | || |||| ||| |||| | |||||||| Sbjct 62016 CACCATCATTTGGTGTAGCTGGAATTTTCCGTTT--TATTCTTTTCTTCCAAGGTTTCCA 61959 Query 176375 CAACTGGACACTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACT 176434 |||||||||||| ||||| ||||| ||||||||||| |||||| |||| |||| |||||| Sbjct 61958 CAACTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACT 61899 Query 176435 ACTATCTGCAATCCATGGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAA 176494 || | |||||| || || | ||||| || || || || | |||||||| || Sbjct 61898 TCTTTGTGCAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTC 61839 Query 176495 CAACACCTTCACTGCGTTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGC 176554 ||||| ||| ||| ||| | | || || | |||||||| || || ||||| || || Sbjct 61838 AAACACATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGC 61779 Query 176555 GAACCGCTTCTGGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTT 176614 ||||| |||||||| || || ||||| || || || || ||||||||||||||||| Sbjct 61778 TAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTT 61719 Query 176615 CTTTATGTTGTTTGTCCCTGTCA-TGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGC 176673 ||| ||| | || || ||||| | ||||| | ||| | ||| |||| | | || Sbjct 61718 CTTCATGCTCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGAT 61660 Query 176674 TTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATC 176733 | || ||||| || ||||| || || || || |||||||| | || |||||||||| Sbjct 61659 TAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATC 61600 Query 176734 CTGAGTTTGAAACTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGA 176793 ||||||| ||||| |||||||| |||||||| ||||||||||||||| | | ||||||| Sbjct 61599 CTGAGTTCGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGA 61540 Query 176794 TGGCACCTGTGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAG 176853 ||||| || ||||| || ||||| |||||||||| || || || || || | | Sbjct 61539 TGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTG 61480 Query 176854 GTAACGC 176860 | ||||| Sbjct 61479 GAAACGC 61473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929408393480