Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq21 829 0.0 >seq21 Length=72700 Score = 829 bits (918), Expect = 0.0 Identities = 771/976 (79%), Gaps = 2/976 (0%) Strand=Plus/Minus Query 177858 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177917 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 177918 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 177976 || | || |||| ||| ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 177977 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTC 178036 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 178037 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 178096 |||||| || ||||| | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 178097 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 178156 || |||||||||||||||| || |||||||| |||| ||| || | |||| |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 178157 CCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 178216 | |||| || | | | |||||||||| ||||||||||| ||||||| ||||||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 178217 GCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCT 178276 ||| || |||||| |||||| ||||||||||| |||||||| ||| | ||||||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 178277 GGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTAC 178336 | || || |||| || || || || ||||||| ||||| ||||| || ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 178337 ATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACAT 178396 ||||||| |||| | || ||||| || || |||||||| || |||||||| |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 178397 GTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGT 178456 | | || || || |||||||||||||||||||| ||| ||| ||||||||||| | || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 178457 TACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTT 178516 || |||||||| | |||||||| ||||| | |||||| ||| || || ||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 178517 CGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGAT 178576 |||||||||||||||||| |||||||| || || || || || |||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 178577 CTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178636 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 178637 TGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGG 178696 |||| | |||||||||||||| || || || | || ||||| || ||||| || || Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 178697 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178756 |||||||||||||||||| | | || | | |||||||| ||||||||||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 178757 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTT 178816 | | |||||||| || || |||||||| ||||||||||| ||||| |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 178817 CCCGCTTGATCTTGCA 178832 ||| ||||| || ||| Sbjct 53098 CCCACTTGACCTCGCA 53083 Score = 567 bits (628), Expect = 9e-157 Identities = 742/1019 (73%), Gaps = 6/1019 (1%) Strand=Plus/Minus Query 179217 GGGTGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGG 179276 || |||||||| | | || |||||| |||| || || || || || || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 179277 TCTGGACTCCTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGAC 179335 |||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 179336 AGCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGA-GGGTGCTA 179394 | | || || || |||||||| |||||| | || ||||| || ||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TA 62311 Query 179395 ACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTAC 179454 |||| || || |||| || || ||||| | | || |||| || || |||||||| | Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 179455 TTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGA 179514 ||||||| || || | || || | ||| || ||||| |||||||| ||| | |||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 179515 ATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAAC 179574 ||||| ||||| ||||| || || | | || || || |||||| | ||||||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 179575 TTGCTCGCCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTG 179634 ||||||| | || | || ||||| |||||||| || || | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 179635 TATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGT 179694 | || || ||| ||||| || || || | || || || |||||| || || || | Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 179695 CCTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGA 179754 | |||||||| || | || ||| | || | || ||| | || |||||||||||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 179755 CGCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTG 179814 | || ||||| ||||| ||||||||||| |||||| |||| || | |||||| || ||| Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 179815 CTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCT 179874 | || || |||| ||||||||||| ||| | | |||||||| || |||| || | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 179875 TTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCT 179934 | || || | | || || | |||||||||||| || ||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 179935 TCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 179994 ||||||| ||||| |||||| | || || || |||||||| |||||||| || |||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 179995 TGTTTGTGCCTGTTA-TGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTC 180053 | || || ||||||| ||||| |||||| || | |||| | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 180054 AACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTT 180113 ||||| ||||| ||||| |||||| || |||||| | || ||||||||||| ||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 180114 GAGACCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCA 180173 || || |||||||| |||||||||||||| || |||||| | ||||||||| ||||| | Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 180174 GTTGATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232 ||||| || ||||| | |||||||| || || || || ||| | || || || Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 61473 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 18754 TGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAA 18813 |||| |||||| ||| ||||||||||| || ||||||||| |||||| | |||||| | Sbjct 20328 TGGGATTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGA 20387 Query 18814 GTCCCATCAATCCCGT 18829 ||||| |||||||||| Sbjct 20388 GTCCCGTCAATCCCGT 20403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606009440922480