Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq21 809 0.0 >seq21 Length=72700 Score = 809 bits (896), Expect = 0.0 Identities = 766/975 (79%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 158388 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 158447 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 158448 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 158506 || | || |||| || ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 158507 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 158566 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 158567 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 158626 |||||| || || || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 158627 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 158686 || |||||||||||||||| || |||||||| |||| ||| || | || | |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 158687 CCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTAT 158746 | | ||||| | | | |||| ||||| ||||| ||||| ||||||| ||| ||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 158747 GCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCT 158806 ||| || |||||| |||||| || ||||| || || || || ||| |||| |||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 158807 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158866 | | || || |||| || || |||||||| || | ||||||||||||||| ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 158867 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158926 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 158927 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 158986 ||| || || ||||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 158987 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTT 159046 ||||| ||||| | |||||||| ||||| | || ||| ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 159047 CGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 159106 ||||||||||||||| || || || || || || || || ||||||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 159107 CTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 159166 ||||||||||||||||||||||||||| ||||| | ||||||||||| ||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 159167 TGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGG 159226 ||| | || ||||||||||| || ||||| | || || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 159227 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 159286 ||||||||||||||||| | | ||| | || |||||| | ||||| ||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 159287 TGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 159346 | | | |||||||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 159347 CCCACTCGACCTTGC 159361 |||||| ||||| || Sbjct 53098 CCCACTTGACCTCGC 53084 Score = 567 bits (628), Expect = 8e-157 Identities = 749/1028 (73%), Gaps = 8/1028 (1%) Strand=Plus/Minus Query 159893 GGGTGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGG 159952 || ||||| |||| | || ||||||||||| || || |||||||| || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 159953 TCTGGACTTCTTCTTCTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAAC 160011 ||||||||| || || |||||| ||| || |||| |||| || |||||||||||||| Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 160012 AACTTTCGCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGA-GGGTGCAA 160070 ||| |||| ||| ||||| || || || | || ||||| || ||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 160071 ACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTC 160130 ||| || || | |||| || ||| | |||| |||| || || |||||||| | Sbjct 62309 -CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 160131 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGA 160190 | ||||| || || || ||||| || ||| | ||| |||||||| ||| | |||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 160191 ATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAAC 160250 || || || || || || || || | |||| ||||| ||||| ||||| |||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 160251 TGGCACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTG 160310 | || ||| | || ||||| ||||| || ||||| ||||| | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 160311 TCTTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGT 160370 | ||||| |||||||| || |||||| | || || || ||||||| || || || | Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 160371 CCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGA 160430 | ||||| || || | ||| || | || | | ||| | ||||| || |||||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 160431 CGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTG 160490 | |||||||| ||||| ||||||||||| |||||| |||| || | |||||| || ||| Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 160491 CCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCT 160550 | || || || | ||||||||||||||||| | |||||||| || |||| || | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 160551 TTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCT 160610 | || || | | || || | |||||||||||| || ||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 160611 TCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 160670 ||||||| ||||| |||||| | || || || |||||||| |||||||| || |||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 160671 TGTTTGTGCCTGTTA-TGGGTCTTTGGACATCCAGTA-TTGGCATTATTGGTCTTGCTCT 160728 | || || ||||||| ||||| | |||| | ||| | |||| | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGT-CAGCACTTGGAGTAGTAGGATTAGCACT 61653 Query 160729 CAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATT 160788 || || ||||| ||||| ||||| |||||||| | || ||||||||||| || || Sbjct 61652 TAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTT 61593 Query 160789 TGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACC 160848 || || |||||||| |||||||| || || || |||||| | ||||||||| | ||| | Sbjct 61592 CGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGC 61533 Query 160849 TGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGC 160908 | || || || ||||| ||| || | ||||| || || || ||||| | || ||||| Sbjct 61532 TCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 61473 Query 160909 CCTTTAAT 160916 ||||||| Sbjct 61472 TCTTTAAT 61465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552473454975680