Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq21 801 0.0 >seq21 Length=72700 Score = 801 bits (888), Expect = 0.0 Identities = 769/979 (79%), Gaps = 10/979 (1%) Strand=Plus/Minus Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929 ||| | || || || | || ||||| || | || ||||||||||| | ||||| ||| Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 178930 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGA 178988 || || | | || ||| ||||| |||||||| || ||| | ||||| ||||| || || Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 178989 TATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTC 179048 || || || || ||||| || || |||| ||||| ||||| ||||||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 179049 TGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGC 179108 ||||||||| || || | |||||||| || || || ||||||||||| ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 179109 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTT 179168 ||| |||| ||||||||||| || |||||||| |||| ||| || | || | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 179169 CCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTAT 179228 | | ||||| | | | | || ||||| ||||||||||| ||||| | |||| |||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 179229 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 179288 |||||| |||||| ||| || |||||||| || || || ||||| | |||||||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 179289 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTAC 179348 | | || || |||| || || ||||||||||| | ||||||||||||||| ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 179349 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 179408 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 179409 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 179468 ||| || || ||||| ||||||||||| || |||||||||||||||||||| ||||| Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 179469 TACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTT 179528 ||||| || ||| | |||||||| ||||||| || ||| ||| || || ||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 179529 CGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 179588 |||||||||||||||||| || ||||| || || || || || |||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 179589 CTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCC 179648 ||||||||| || || || ||||||||||| || | ||||||||||| ||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 179649 GGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGG 179708 || | || ||||||||||| |||||||| | || || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 179709 TTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACATGGGCG 179766 ||||||||||||||||| | | || |||| |||||||| | ||||||||||| Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGA--TTCAAACGGACGTGTGATCAACACATGGGCT 53161 Query 179767 GACGTATTG--AACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACA 179824 || ||||| |||||||| | ||||||||||| ||||| ||||||||||| |||| Sbjct 53160 GA--TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACA 53103 Query 179825 ACTTCCCACTCGACCTTGC 179843 |||||||||| ||||| || Sbjct 53102 ACTTCCCACTTGACCTCGC 53084 Score = 648 bits (718), Expect = 0.0 Identities = 771/1036 (74%), Gaps = 7/1036 (1%) Strand=Plus/Minus Query 180015 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGG 180074 || |||||||| | | || ||||||||||| || ||||| || ||||| || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 180075 TCTGGACTACTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCAC 180133 |||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 180134 AGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAA 180193 | | || || || |||||||| |||||| | || ||| || |||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 180194 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 180253 ||| || || |||| || || ||||| | |||| |||| || || |||||||| || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 180254 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAA 180313 |||||| || || | || || | ||| ||| ||||| |||||||| ||| | |||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373 ||||| ||||| ||||| || || | |||| ||||||||||| || || |||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGT 180433 || ||| | || ||||| ||||| || ||||||||||| | || || ||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 180434 ATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTC 180493 ||||| ||||| || || |||||||| || || || ||||||||||||| || || Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 180494 TTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTC-AGGGTTTCCACAACTGGA 180552 ||||| ||||| | ||| || | || | || ||||||| | |||||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCT-TTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 180553 CCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAG 180612 | || ||||| ||||| ||||||||||| |||||| |||| |||| |||| | || | | Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 180613 CAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCT 180672 |||| || || | |||||| ||||||||||| | |||||||| || ||||||| | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 180673 TTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCT 180732 | ||||| | |||| |||| || || |||||||| ||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 180733 TCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 180792 ||||||| ||||| |||||| | || || || |||||||| |||||||| || |||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 180793 TGTTTGTGCCTGTTA-TGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTC 180851 | || || ||||||| ||||| |||||| || | |||| | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 180852 AACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTC 180911 ||||| ||||| ||||| ||||| ||||||||| | || |||||||||||||||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 180912 GAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCT 180971 || || |||||||| |||||||| || | || |||||| | ||||||||| ||||| || Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 180972 GCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGCA 181031 ||||| || || |||||| | | |||||||| || || || ||| | || ||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 181032 TTGTGATTCAATCTCT 181047 | | |||||| |||| Sbjct 61471 CTTTAATTCAA-CTCT 61457 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 18907 TGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAA 18966 |||| |||||| ||| ||||||||||| || ||||||||| |||||| | |||||| | Sbjct 20328 TGGGATTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGA 20387 Query 18967 GTCCCATCAATCCCGT 18982 ||||| |||||||||| Sbjct 20388 GTCCCGTCAATCCCGT 20403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610329439788480