Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16 138 9e-28 >seq16 Length=955652 Score = 138 bits (152), Expect = 9e-28 Identities = 367/549 (67%), Gaps = 15/549 (3%) Strand=Plus/Plus Query 43742 TACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA 43801 || || ||||| ||||| |||||||| || || || |||||||||| | || | Sbjct 697488 TATAAGAAAGCGGAGGCGAGCTTTTGGACCGCGGAGGAGATTGATTTGACGTACGATTAC 697547 Query 43802 GCACATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTT 43860 | ||||||| | || || | | || || |||||||||| | ||||||||||| Sbjct 697548 AGAGATTGGATCACGTTGAA-CGAGAACGAGCAACATTTTATCACGCACGTTTTGGCGTT 697606 Query 43861 TTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT-CGGTTTGCGCAAGAAG 43919 ||| || || ||||| || ||| || ||||| | || |||||| | |||| Sbjct 697607 TTTCGCCGCCTCGGACGGTATCGTCTTGGAGAATTTA-TGCGTGCGGTTTATGAAAGAGA 697665 Query 43920 TTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCA--AATTGCCATAGAAAATATTCA 43977 |||| | || || || || ||||| | |||||| ||| |||| || |||||||| Sbjct 697666 TTCAGGTTCCCGAGGCGAGAGCGTTTTACGCGTTTCAGCAAT--CCATCGAGAATATTCA 697723 Query 43978 TTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCG 44037 |||| |||| | || |||| |||||| | ||||| ||||| Sbjct 697724 CAGCGAAACGTACGCGTTGTTGTTAGAGACGTACGTGAAAGACCCAATTCAGAAGAGAAA 697783 Query 44038 ATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 |||||| ||||| | || | || | | ||| | || || || ||||| | || Sbjct 697784 TTTGTTTCGAGCGATTCATACGATTCCAACCGTGAAAAAGAAGGCGGATTGGGCGATGAA 697843 Query 44098 ATGGATAAA---TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154 |||||| | ||| | |||| ||||| | |||| || ||| ||||| Sbjct 697844 ATGGATCGAGTCTTCGTCGGCGAGGTTTGCCGAACGTTTAGTCGGTTTCGCATGCGTGGA 697903 Query 44155 AGGCATTTTCTTTTCAGGATC-GTTTGCG-GCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 |||||||||||| ||| | |||| | ||||| |||||| ||||||| |||| ||| Sbjct 697904 AGGCATTTTCTT--CAGCGGCAGTTTCTGCGCCATCTTTTGGCTAAAGAAGAGAGGATTG 697961 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272 ||| || ||||||||||| || ||||| || ||||| || ||||| || || |||||| Sbjct 697962 ATGAAAGGTTTGACGTTTTCCAACGAGTTGATCAGTCGAGACGAAGGGTTGCACTGCGAT 698021 Query 44273 TTTGCTTGC 44281 || || ||| Sbjct 698022 TTCGCCTGC 698030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455898276105