Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq16 120 3e-22 seq17 109 5e-19 seq12 109 5e-19 seq1 95.1 1e-14 seq7 84.2 2e-11 >seq16 Length=955652 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| ||||| ||||| || |||||||| || || || || ||||| ||| | Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| | ||| ||||||||| |||| | ||||| ||||||||||| Sbjct 707802 AACGTTCTGC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707860 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || || || |||||| || | | | || | ||||| | | ||||| Sbjct 707861 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 707920 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | || || | |||||| |||| ||| || || ||||||||||| Sbjct 707921 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || || || ||||| ||||| || |||||||| || || || || ||||| ||| Sbjct 707285 GCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGC 707344 Query 27080 CAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || ||| || ||||||| | ||| ||||||||| |||| | ||||| |||||||||| Sbjct 707345 CAACGTTCTGC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCG 707403 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||| || || || |||||| || | | | || | ||||| | | || | Sbjct 707404 GGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGA 707463 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| | || || | |||||| |||| ||| || || ||||||||||| Sbjct 707464 CTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| ||||| ||||| || |||||||| || || || || ||||| ||| | Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| | ||| ||||||||| |||| | ||||| ||||||||||| Sbjct 707574 AACGTTCTGC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707632 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || || || |||||| || | | | || | ||||| | | || || Sbjct 707633 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 707692 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | || || | |||||| |||| ||| || || ||||||||||| Sbjct 707693 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| ||||| ||||| || |||||||| || || || || ||||| ||| | Sbjct 707970 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 708029 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| | ||| ||||||||| |||| | ||||| ||||||||||| Sbjct 708030 AACGTTCTGC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 708088 >seq17 Length=937610 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| |||||||| ||||| ||||| || || || || ||||||||||| || ||||| | Sbjct 351323 TGCCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGG 351382 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | ||| || | ||||| | ||||| |||||| | || | ||||| ||||||||| Sbjct 351383 CTAAAGTT-CGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGC 351441 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||||| || ||| || || | | | || | |||||| | | || Sbjct 351442 GGGATGCCCTCTTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCG 351501 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 ||||| || || || | |||||||| || Sbjct 351502 ACTTCGAGGGTGATCGTCTTGCCCGTGAG 351530 >seq12 Length=1122692 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GC 27078 ||| || ||||| ||||| ||||| || || || || |||||||| || ||||| || || Sbjct 916941 GCCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGC 917000 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | | ||||||| | ||||||||||||| |||| | ||||| || ||||||| Sbjct 917001 GAGAGTT-CTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCG 917059 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || || || ||||| | | || | ||||| | || || | Sbjct 917060 GAATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGA 917119 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTT 27232 |||| || || || | ||| || |||| |||||| Sbjct 917120 CTTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq1 Length=1352724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 290/445 (65%), Gaps = 5/445 (1%) Strand=Plus/Plus Query 131545 TTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAATTGGG 131604 ||||||||| || |||||| | |||||| | || || | | | |||| || Sbjct 25760 TTTTTCGTACTTGGTGTACAAAGCTTCAAACTCTTCACCCCAGCATTCGGACAAACCCGG 25819 Query 131605 ACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAA 131664 || ||| | || ||||||| || |||| |||||| | ||| |||| ||||| ||||| Sbjct 25820 GCACTCGTTCGGGCACATTAACGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAA 25879 Query 131665 ATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAt 131724 ||| | ||| || |||| |||| || | |||| | ||||| | ||| | | Sbjct 25880 ATCGTTCGTCCACAAACCGTAAAACAAGTCACGAGCTCTCGCTTCTTCCTT-CCCGTGGT 25938 Query 131725 tttttt-CAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCA 131783 | ||| ||| | | |||| || ||||| | ||||| ||||| | || | || | Sbjct 25939 TCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAA 25998 Query 131784 TTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGC 131840 ||||| ||||||||| |||||||| | || | | || ||| |||| | |||| Sbjct 25999 AAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGC 26058 Query 131841 GCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGG 131900 | | ||| || | |||||| | | | || || |||| ||||||| | ||| Sbjct 26059 GAAGCATCGGAATGATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGACGAAGTGG 26118 Query 131901 CTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATT 131960 | | ||| | ||||| | |||||||| ||| || | || || || ||||||| Sbjct 26119 CGCGGATGTCGTGAATAGACAAACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATT 26178 Query 131961 TGGTTAGAGTGTTATAGATACCTTC 131985 | | |||| ||||||||||| Sbjct 26179 CCTTCAACGTGTCGTAGATACCTTC 26203 >seq7 Length=519835 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || ||||| |||||||| || ||||||||||| || || || || |||| || Sbjct 260371 CGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCG 260430 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||| |||||| | || | ||||| || || || || | || || || Sbjct 260431 TCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTG 260490 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || || | | | || | ||||| | || ||| ||||| | || || Sbjct 260491 TCTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATC 260550 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGA 27240 | |||||||||| | |||| | ||||| Sbjct 260551 GTTTTGCCCGTC--ACTTTTTATAAAGA 260576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934291243352