Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 seq14 100 4e-16 seq15 91.5 2e-13 >seq1 Length=1352724 Score = 158 bits (174), Expect = 1e-33 Identities = 550/851 (65%), Gaps = 17/851 (2%) Strand=Plus/Plus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| ||||| || | || || ||| ||| | || | || || Sbjct 25539 GCGATGGAGGCCAAGTTACAAACGGCAGTTTCTTCCGGCGAGGTGAATTCGACGATCTCT 25598 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||||||||| || || || |||||||| || | ||| || ||||| ||| ||| Sbjct 25599 GTGCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCAC 25658 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 ||||||||| | | |||||| || | || || ||| ||| | | ||||| || | Sbjct 25659 GCATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAAC 25718 Query 118890 CAGACATCGGCAGCTGGCACAGTGG-CGTTGGCTCGCCCCT-----CTTCCTCGTACTTT 118943 || | || ||||| | || ||| || ||| | ||| |||||||| Sbjct 25719 CAAA-----GCTGCTGGG-CGTTGATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTG 25772 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||||| | |||||||||||||||||| | || || | || || || | ||| Sbjct 25773 GTGTACAAAGCTTCAAACTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGG 25832 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 || | | | ||| | || || || || | |||||||| | || |||| Sbjct 25833 CACATTAACGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCAC 25892 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 | | | || | || ||| | |||||||| | ||| || || ||||| || Sbjct 25893 AAACCGTAAAACAAGTCACGAGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCG 25952 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA 119183 | |||| | ||| || | |||||||||||| ||||| | || | | ||||| || Sbjct 25953 AGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGC 26012 Query 119184 CGACCA--GCCT-GGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 ||| |||| ||| || |||||||| ||| |||| || || |||||||| |||||| Sbjct 26013 TTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATG 26072 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | || || ||||| || | ||| ||| | |||| | || ||||| Sbjct 26073 ATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGA 26132 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 || || ||||||||| || || |||| || || |||||| ||| | | || || Sbjct 26133 ATAGACAAACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCG 26192 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || || || ||||| |||| | || | ||||| || | ||| || Sbjct 26193 TAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGT 26252 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480 | || ||||| |||||||| | ||||| | ||||||| | | | || || |||| | Sbjct 26253 CGCGGCGTACCGGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAAC 26312 Query 119481 TTGTCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 ||| || || || | || | | || || | | ||| |||||||| || || | Sbjct 26313 ATGTGATACGTATCAACAGCCTTTTCG-ATATCCTTCTTGTGGATACCGATGGATACTCT 26371 Query 119540 CATAAACATGT 119550 ||| ||||||| Sbjct 26372 CATCAACATGT 26382 >seq14 Length=1037991 Score = 100 bits (110), Expect = 4e-16 Identities = 223/332 (67%), Gaps = 2/332 (1%) Strand=Plus/Plus Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||| | |||||||| ||||| || |||| | |||| |||||| |||| ||| | Sbjct 66017 GATCGGCAACGTACTCGATGTAATCTCTCATCATGTCGGCGTTCATGCCGACGAGCGCGC 66076 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || | |||||| | | ||| |||||||||| || || || || || || Sbjct 66077 ACGGCAACGCGTCGCACACAAACTCCTTCTCAATTTCAACCGCCTCGGTAACAATCTTTC 66136 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACTCC 130024 | ||||| ||| || | ||| ||| || || | || |||| |||| || Sbjct 66137 TCAACTTCTCCTCGCCCGGCGTGTTGTTCAACATCGTGTAAAGCAAGCACG-CAAAATCT 66195 Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084 ||| | ||| ||||| | |||||| | || || |||||| || || ||||| | Sbjct 66196 CTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCCGGCATCATG 66255 Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 || | |||||| | |||| | || | || || ||||| ||||||||||| || || || Sbjct 66256 CCTCTCTTCTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATGCCTTCGACG 66315 Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || |||||||| | | ||| || || ||||| Sbjct 66316 CAGGCGAACGCGACCAAACGTTCGGCGAAGGA 66347 >seq15 Length=989707 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 14228 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT---TGATT-TTC 14283 || ||| |||||| ||||| ||||| ||||| ||||| ||||| ||| || || ||| Sbjct 2579 CGCTGCGAACCGACCGCGTCGATTTCGTCGATAAAAACAATACACGGTGCTTGCTTCTTC 2520 Query 14284 ACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCAC 14343 | | ||| ||| | |||||||||| || ||||| || |||||||||||| | Sbjct 2519 GCCG----CTTTAAATAGTTCTCGCACTCGTCGAGCGCCGACGCCAACAAACATCTCCTC 2464 Query 14344 AAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGC 14403 ||| | | | ||||| | | ||| || |||| | ||| ||||||| |||| || Sbjct 2463 AAACTCAGAGCCGGAAACGTAAAAGAACGGCACGTCCGCTTCGCCCGCGACGGCTTTCGC 2404 Query 14404 GAGGAGGGTCTTCCCCGTCCCTGG 14427 ||| | ||||| || ||||| || Sbjct 2403 GAGCAAAGTCTTTCCTGTCCCCGG 2380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435037660760