Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-34 seq14 107 2e-18 seq12 95.1 1e-14 >seq1 Length=1352724 Score = 161 bits (178), Expect = 1e-34 Identities = 559/864 (65%), Gaps = 25/864 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||||| ||| | || |||||||||| || | | || || || | Sbjct 26390 CCCGCAGCACATGTTGATGAGAGTATCCATCGGTATCCACAAGAAGGATATCGAAAAGGC 26331 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || || ||| | |||| || || | | | ||||| | |||||| | || Sbjct 26330 TGTTGATACGTATCACATGTTGTCTGAACGTTGGATGACCCACGCGTCGCCAACCTTGTT 26271 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || ||||| || |||| ||| | ||| ||||| | || || ||||| || Sbjct 26270 CAACGCCGGTACGCCGCGACCGCAACTCTCCTCGTGCTTTTTGATTTGCATGAAGGAAGA 26211 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || | |||||||| | || | | ||| || ||| || || |||| || || Sbjct 26210 CTCCATTGAAGGTATCTACGACACGTTGAAGGAATGCGCGTGCATTTCCAAGTCCGCCGG 26151 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATC-TCGTA--TTCGGGGGAC 104517 |||||||| || || || || | | |||| | || ||||| || | || || Sbjct 26150 CGGTATTGGTTTGTCTATTCACGACATCCGCGCCACT---TCGTCGTACATTAGAGGCAC 26094 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||| ||| || | ||||| ||||| ||||||||||| || |||| ||| ||| | || Sbjct 26093 AAACGGTACCTCGAACGGTATCATTCCGATGCTTCGCGTGTTCAACGACACGGCGAGGTA 26034 Query 104578 TGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | |||| || || || ||||| || | || | || || || || ||||| Sbjct 26033 CGTGGACCAAGGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATTTACCTCGAACCGTGGCA 25974 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | | || ||| | || | || || ||||| ||||| || | || || ||| | Sbjct 25973 CTCTGACATCTTCGACTGGCTCGACTTGCGAAAGAACCACGGGAAGGAAGAAGCGAGAGC 25914 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 || || | || | || | | |||| ||| | |||||||| ||||| || || | Sbjct 25913 TCGTGACTTGTTTTACGGTTTGTGGACGAACGATTTGTTCATGAAAAGAGTCGAAGAAAA 25854 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTG 104813 ||||| ||| | | | || || || || || ||| | ||||| ||| | ||||| Sbjct 25853 CGGCAAGTGGACGTTAATGTGCCCGAACGAGTGCCCGGGTTTGTCCGAATGCTG-GGGTG 25795 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAA------GGTCGGGCGAC-TGCG 104866 | ||||||||||| | ||||| |||||||| ||||| ||| | ||| | Sbjct 25794 AAGAGTTTGAAGCTTTGTACACCAAGTACGAAAAAGAAAACAAGGGTAAGAAGACGATCA 25735 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 ||| ||||| || | ||| || ||||| | | ||| || ||||||| Sbjct 25734 ACG--CCCAGCAGC-----TTTGGTTTGCGATTCTTGAAGCGCAAGTGGAAACTGGTAAC 25682 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || |||||| | | ||| || || || |||| ||| || ||| | |||||||| | Sbjct 25681 CCGTACATGTTGTTCAAGGATGCGTGCAACCGCAAGTCGAACCAACAAAATTTGGGCACG 25622 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||||| ||||| | || ||||| ||| | ||||| || || || || || Sbjct 25621 ATCAAATCGTCCAACTTGTGCACAGAGATCGTCGAATTCACCTCGCCGGAAGAAACTGCC 25562 Query 105047 GTGTGTAACCTCGCATCAATCGCT 105070 || |||||| | || || |||||| Sbjct 25561 GTTTGTAACTTGGCCTCCATCGCT 25538 >seq14 Length=1037991 Score = 107 bits (118), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| || || || | |||| || || || || || || ||||||||||| || || Sbjct 66347 TCCTTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGCTCT 66288 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 |||||| | || || |||||||||||| |||| | ||||| || ||| |||||||||| Sbjct 66287 TTCTGCTCAATCTACTGGCTCAAGAAGAGAGGCATGATGCCGGGGCTCACCTTCTCCAAC 66228 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 ||| | ||||| | ||||| || | ||| ||| |||||| Sbjct 66227 GAGTTGATCTCCAGAGACGAAGGTTTGCACAGAGATTTTGCG 66186 >seq12 Length=1122692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 180/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 168475 ACGCGTACCAAACTGACCACACGGCTC-AAGAAGATTGATATTGTTTGAACCCATGTAGT 168533 |||||||||||||||||| | ||| | || ||| ||||| ||||| | || | | | | Sbjct 1064175 ACGCGTACCAAACTGACCGCTCGGGACTAACAAG-TTGATGTTGTTCGTCCCAACGAAAT 1064233 Query 168534 CATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCT 168593 | | || | || || || || ||| ||||| |||| |||||||| || || | Sbjct 1064234 CTTGAGCGAGATTAACGATTGTCGACGCAAGAGACGCTTCGCCGTGGTGATAGGCGGAGT 1064293 Query 168594 TCTCTGCGACAAATGCCGC-CAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGG 168652 || | ||| | |||| ||| ||||| ||||| || || ||| | || | | | Sbjct 1064294 GTTCCGAGACGTAA-CCGCTCAATTGCGCGACTTTGATGTCCGACTTCAACTTTCTCTTG 1064352 Query 168653 AAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATA 168712 ||||| | ||||||| || |||||||||||||||| |||||| | || ||| Sbjct 1064353 AAGCACGAAAACATAACTTTTCGTTGCGAAGGCTTGAAACCATCAATGGCGGATGGAATA 1064412 Query 168713 GAACGCTTCAAGTCCGCCAA 168732 |||||| | || |||||||| Sbjct 1064413 GAACGCATTAAATCCGCCAA 1064432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260646894040