Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 seq16 93.3 5e-14 seq12 87.8 2e-12 >seq1 Length=1352724 Score = 109 bits (120), Expect = 6e-19 Identities = 524/826 (63%), Gaps = 23/826 (3%) Strand=Plus/Plus Query 80944 GTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGG 81003 || || |||||||| || |||||||| || || || || || || |||| |||| ||| Sbjct 25581 GTGAATTCGACGATCTCTGTGCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGG 25640 Query 81004 TTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGT 81063 || |||||| |||||| || |||||| | ||||||||||| |||| || || || || Sbjct 25641 TTCGACTTGCGGTTGCACGCATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGC 25700 Query 81064 GACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCG 81123 | | || || || ||||| || | || |||| | ||| ||| ||| Sbjct 25701 GCTTCAAGAATCGCAAACCAAAGCTGCTGGGCGTTGATCGTCTTCTTACCCTTGTTTTCT 25760 Query 81124 GCCACATACTTGGCGT---AAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT 81180 | ||||||| || ||||| || |||| |||| ||| | | | Sbjct 25761 TTTTCGTACTTGGTGTACAAAGCT---TCAAACTCTTCACCCCAGCATTCGGACAAACCC 25817 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCT---ACAGCCTTCATG 81237 ||||||||||| |||||||| | ||| | || |||| ||| || |||||| Sbjct 25818 GGGCACTCGTTCGGGCACATTAACGTCCACT---TGCCGTTTTCTTCGACTCTTTTCATG 25874 Query 81238 ---AAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCA 81294 ||| ||| | |||| | || |||| ||| || | ||| || || | Sbjct 25875 AACAAATCGTTCG---TCCACAAACCGTAAAACAAGTCACGAGCTCTCGCTTCTTCCTTC 25931 Query 81295 CCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATAC 81354 || ||||| ||||| ||||| |||| | |||||| | ||||| || || || || Sbjct 25932 CCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAA 25991 Query 81355 ACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTA 81411 | ||| | | |||||||| || ||| || |||| ||||| | || || |||| Sbjct 25992 ATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTG 26051 Query 81412 AATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGAC 81471 || || || | ||| || |||||||| | || |||||| || || || |||| Sbjct 26052 AACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGAC 26111 Query 81472 CCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531 ||||||| | | | || || | ||| || || || | |||| ||||| Sbjct 26112 GAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCGGCGGACTTGGAAATGCAC 26171 Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG 81591 || || |||| || || || || || || ||| |||| |||||| || ||| Sbjct 26172 GCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAA 26231 Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGA 81651 || || || | || || | | ||||| ||||||| ||||| | |||||| Sbjct 26232 AAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAACAAGGTTGGCGACGCGTGG 26291 Query 81652 ATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCG 81711 | | |||| | |||| || || ||| || || | | ||||| | | Sbjct 26292 GTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGCCTTTTCGATATCCTTCTTG 26351 Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCGTCTCG 81756 || |||||||| | ||| | ||| ||||||| ||| ||||| |||| Sbjct 26352 TGGATACCGATGGATACTCTCATCAACATGTGCTGCGGGCG-CTCG 26396 >seq16 Length=955652 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || ||||| || || || | || |||||||| Sbjct 707968 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTTGAGTCTTCC 707909 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || || || ||| Sbjct 707908 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707849 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || |||||||| | || || | | || | || || || || Sbjct 707848 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707789 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 |||| ||||| || || | || | || |||||| Sbjct 707788 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGT 707753 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || ||||| || || || | || || ||||| Sbjct 707512 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707453 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || || || ||| Sbjct 707452 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707393 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || |||||||| | || || | | || | || || || || Sbjct 707392 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707333 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | || | || |||||| | || || || Sbjct 707332 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTACGAGGCGG 707286 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | || ||||| || || || | || || ||||| Sbjct 707740 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707681 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || || || ||| Sbjct 707680 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707621 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || |||||||| | || || | | || | || || || || Sbjct 707620 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707561 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 |||| ||||| || || | || | || |||||| Sbjct 707560 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGT 707525 >seq12 Length=1122692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 |||| || |||||||| ||||||||||| ||||| || ||||||||||| | ||||| | Sbjct 917092 TGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTTCG 917033 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | ||||| || | || || | | || || || || || || ||||||| ||||| | Sbjct 917032 CCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATCAA 916973 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || | || |||||| | || || || Sbjct 916972 CCTTGCACTTGGTGTTGCGTTTGCGAGGCGG 916942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310250293520