Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq17 138 1e-27 seq12 132 4e-26 seq16 131 1e-25 seq7 116 3e-21 >seq17 Length=937610 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || || |||||| | || || || ||||| || | || ||| | || || | ||||| Sbjct 351530 CTCACGGGCAAGACGATCACCCTCGAAGTCGAGTCTTCGGACACTATCGACAACGTCAAG 351471 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 ||||| ||||||||||| ||||| || || ||||| ||||| || || | |||||| Sbjct 351470 GCGAAAATCCAAGACAAAGAGGGCATCCCGCCGGATCAGCAGCGATTGATCTTCGCCGGA 351411 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTT-CCGATTACAACATTCAAAAGGAGTCGACCTT 27187 |||||||| ||||| | ||| | || |||| || ||||||||||| || || ||||| Sbjct 351410 AAACAATTAGAAGATGGC-CGAACTTTAGCCGACTATAACATTCAAAAAGAATCCACCTT 351352 Query 27188 ACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||||||||| || ||||| Sbjct 351351 GCACTTGGTCTTGCGTTTGCGCGGCGGCAT 351322 >seq12 Length=1122692 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062 |||||| |||| || || | || || || ||||| || | || ||| |||| || | Sbjct 917153 AAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAAC 917094 Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122 || ||| |||||||||||||| || ||||| || || || || ||||| || || | | Sbjct 917093 GTGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTTC 917034 Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182 ||||| ||||| || |||||| | || | | ||||||||||| ||||| || || Sbjct 917033 GCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATCA 916974 Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| || ||||| ||||||||||| || ||| Sbjct 916973 ACCTTGCACTTGGTGTTGCGTTTGCGAGGCGGC 916941 >seq16 Length=955652 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| ||||| | || || | ||||| || | ||| Sbjct 707512 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707453 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| ||||| || || || ||||| Sbjct 707452 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707393 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTT-CCGATTACAA 27166 ||||| || || | |||||| || || || |||||| | || |||| |||||||||| Sbjct 707392 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCA-GAACGTTGGCCGATTACAA 707334 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||||| || || || ||||| |||||||| || || ||| Sbjct 707333 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTACGAGGCGGC 707285 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| ||||| | || || | ||||| || | ||| Sbjct 707740 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707681 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| ||||| || || || ||||| Sbjct 707680 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707621 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTT-CCGATTACAA 27166 ||||| || || | |||||| || || || |||||| | || |||| |||||||||| Sbjct 707620 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCA-GAACGTTGGCCGATTACAA 707562 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || || || ||||| ||||||||| | || || || Sbjct 707561 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGGGAT 707511 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| ||||| | || || | ||||| || | ||| Sbjct 707968 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTTGAGTCTTCC 707909 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| ||||| || || || ||||| Sbjct 707908 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707849 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTT-CCGATTACAA 27166 ||||| || || | |||||| || || || |||||| | || |||| |||||||||| Sbjct 707848 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCA-GAACGTTGGCCGATTACAA 707790 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || || || ||||| ||||||||| | || || || Sbjct 707789 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGGGAT 707739 Score = 125 bits (138), Expect = 6e-24 Identities = 206/297 (69%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 135431 TACACGCGCGAGCAATGGGACCAAGCGTTGACGCATGACCCGTTGTGGAACGCGGCACAA 135490 |||||| ||| ||| || ||||| ||||| ||| || ||||| || || ||| Sbjct 16838 TACACGTACGAAGAATTTGAGCAAGCCAAAACGCACGACAATTTATGGAATGCTGCGCAA 16779 Query 135491 CGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAG 135550 || |||| | | ||||||||||| |||||||||||||||||||||||||| || Sbjct 16778 CGCGAGCTCGTGTACGGTGGCAAAATGCATGGATTTATGCGCATGTATTGGGCAAAGAAA 16719 Query 135551 ATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGAT 135610 ||| |||||||||| | | || | | | || | || |||| || ||| || ||| Sbjct 16718 ATACTGGAATGGTCCGATACTCCCGAAAACGCTTTGAAATACGCCATCGCTTTGAACGAT 16659 Query 135611 TACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTTGTATGTGGTCTATTTGC 135670 | | |||||| | ||| | | || ||||| || || |||||||| || | Sbjct 16658 CGTTGGTCGCTCGATGGAAGAGATCCGAGCGGTTACGTCGGATGCATGTGGTCCATCGTC 16599 Query 135671 GGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCAAGATTCGCTATATG 135727 || || ||||||||||| ||||| ||||| | | || || || ||||| || ||| Sbjct 16598 GGCGTGCACGATCAAGGGTGGAAAGAGCGAGAGATATTCGGGAAAATTCGGTACATG 16542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 ||| || || || ||||| ||||| || || | |||||| || || || |||||| | Sbjct 708095 AGGAATTCCGCCGGATCAGCAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCA- 708037 Query 27149 GACCGTTT-CCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGC 27207 || |||| ||||||||||||| || |||||||| || || || ||||| ||||||||| Sbjct 708036 GAACGTTGGCCGATTACAACATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGA 707977 Query 27208 GGGGTGGCAT 27217 | || || || Sbjct 707976 GAGGCGGGAT 707967 >seq7 Length=519835 Score = 116 bits (128), Expect = 3e-21 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||| |||||| | ||| ||||| | || || | ||||||||| | || ||| | || Sbjct 260574 TTTATAAAAAGT--GACGGGCAAAACGATCACCTTGGAAGTGGAATCCTCGGACACCATC 260517 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| ||||| |||||||| |||||||| || || || || ||||| || Sbjct 260516 GACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGCGGTTG 260457 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | |||||| ||||| || |||||| | || | | ||||| ||||||||||| Sbjct 260456 ATCTTCGCCGGGAAACAGTTAGAAGACGGACGCACTTTGGCGGATTATAACATTCAAAAA 260397 Query 27177 GAGTCGACCTTACATTTGGTTTTGCG 27202 ||||| || ||||| ||||| || || Sbjct 260396 GAGTCCACGTTACACTTGGTGTTACG 260371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918285833920