Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq21 648 0.0 >seq21 Length=72700 Score = 648 bits (718), Expect = 0.0 Identities = 680/891 (76%), Gaps = 2/891 (0%) Strand=Plus/Minus Query 189758 TTCGTTGTTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTT 189817 ||| | || ||||| || ||||| || || || ||||| ||||| || | |||||||| Sbjct 53973 TTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTA 53914 Query 189818 GCAGGTTCACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAAT 189877 | || |||||| | || || ||||||||||| ||||||||||| || ||| ||||||| Sbjct 53913 TCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAAC 53854 Query 189878 GCTATTGGTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTAC 189937 ||||| || || |||||||||||||||||||||||||| ||| | ||||||||||||||| Sbjct 53853 GCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTAC 53794 Query 189938 AATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATG 189997 || ||||| ||||||||| | | | | |||||| | || || | | |||||||| Sbjct 53793 AACGGTGGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATG 53734 Query 189998 GGAAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTAT 190057 || | ||||||| | |||| | | |||| ||| | ||||||||| ||| ||||| Sbjct 53733 GGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTAC 53674 Query 190058 TCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCA 190117 || || || ||| | || ||| |||||||||| | | |||||| | || ||||| || Sbjct 53673 TCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCT 53614 Query 190118 TTCTCTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAA 190177 |||||||| ||||||||| | ||||| || || || |||||||||||| | |||||||| Sbjct 53613 TTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAG 53554 Query 190178 GCAGAACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGT 190237 || || || || |||||||||||||||||||| ||| || ||||| ||| | || ||| Sbjct 53553 GCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGT 53494 Query 190238 GGAGCATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACA 190297 || || | |||||||| ||||| |||||||| ||||| ||||| || ||| | ||||| Sbjct 53493 GGTTCACTTTTCTCTGCTATGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACT 53434 Query 190298 ACTGGTTTAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAAC 190357 |||| || ||| ||| || |||||||| |||||||||||||| || |||||| Sbjct 53433 ACTGAGAACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAAC 53374 Query 190358 ATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAAC 190417 || ||||||||||| |||||||| || | ||||||||||| || ||||||||||||||| Sbjct 53373 ATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAAC 53314 Query 190418 TCAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCA 190477 ||| | | ||||||||| | || | | ||||||| | | ||||| ||| | Sbjct 53313 TCACGTTCACTCCACTTCTTCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCT 53254 Query 190478 ATGGGTATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTT 190537 | ||||||| || ||||| |||||| | || || |||||||| |||||||| || || Sbjct 53253 CTTGGTATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTA 53194 Query 190538 GATGCACAAGGTAAAATTGTTCCA-ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGG 190596 ||| || || | | || || | ||||||| ||| || | ||| | || |||||||| Sbjct 53193 GATTCA-AACGGACGTGTGATCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGG 53135 Query 190597 TATGGAAGTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 190647 ||||||||||||||| || | || || |||||||||||||| ||||| || Sbjct 53134 TATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTCGC 53084 Score = 520 bits (576), Expect = 1e-142 Identities = 744/1048 (71%), Gaps = 25/1048 (2%) Strand=Plus/Minus Query 190790 GGTTGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGG 190849 |||||||| || | ||||||||| | || ||||| | || |||||| |||||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 190850 TCTGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACT 190909 ||||| ||| ||||||| |||||||| | | | || ||||||| ||| | || ||||| Sbjct 62428 TCTGGACTTTTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAACA 62369 Query 190910 ACATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAAC 190969 ||||| || ||| ||||| ||||| || | ||| ||||||||||||||| ||| Sbjct 62368 ACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAAC 62309 Query 190970 TTTTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCA-TAGTTTATTATTCTT 191028 || | || |||||||||| || || | || |||| || | || || | ||| Sbjct 62308 TTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCTT 62249 Query 191029 ATGGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAA 191088 ||||| ||||| ||||||||| || ||||||| ||| |||||||| | |||| Sbjct 62248 -TGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 191089 CTTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAAT 191148 || ||||| ||||| || | |||||| | || ||||| ||| | ||||| |||||||| Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 191149 TGCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGT 191208 ||| | || ||| | || ||||| || |||| || || || || || || Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 191209 TTTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTC 191268 || | ||||||| | || || |||||||| || |||||||||||||||| || Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 191269 ATTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTAC 191328 |||||| || || | ||| || | | |||||| ||| | |||||||||||||| || Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 191329 ACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGC 191388 ||| ||||| ||||||||||||||||| || ||| | || |||| |||| | || ||||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 191389 CATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGG 191448 ||||| || || || ||| ||||||| | | || |||||| Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGA------------------AGATGG 61848 Query 191449 TCA-AGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATT 191507 | | ||||||| || || | ||||| | ||||| || | || || ||||| | Sbjct 61847 TGATGGTTCAAA----CACATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACT 61792 Query 191508 CTATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAA 191567 | ||| | || || ||| | |||||||||||||| || ||| | || ||||| ||||| Sbjct 61791 CAATGGTAACGGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGC 61732 Query 191568 GATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAG 191627 | | || |||||||| ||| | || || ||||| | || | |||| ||| || | | Sbjct 61731 GTTGGCTTCACTTCTTCATGCTCTTCGTACCTGTTACTGGGTTATGGATGTCAGCACTTG 61672 Query 191628 GTATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAG 191687 | | ||||| | ||||||||| | | ||||| || || ||||| |||||||| | | Sbjct 61671 GAGTAGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTG 61612 Query 191688 CAGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTA 191747 | |||||||| || ||||| ||||| ||||| || ||||||||||||||||| ||||| | Sbjct 61611 CTGCAGAAGATCCTGAGTTCGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAA 61552 Query 191748 TGAGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAG 191807 | | ||||||||| | | ||| || |||||||| ||| |||| ||||| ||||| | Sbjct 61551 TCCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGG 61492 Query 191808 TTCTACCTAGAGGAAATGCATTGTAATT 191835 | || || | ||||| || | ||||| Sbjct 61491 TACTTCCACGTGGAAACGCTCTTTAATT 61464 Score = 210 bits (232), Expect = 3e-49 Identities = 196/249 (79%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 182483 TTAATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAG 182542 || ||||||||||| || ||||| || ||||| || || ||||| ||||||||||| Sbjct 25391 TTTATGTCTCACGCTGTAAAAATTTACGATACATGTATCGGATGTACACAATGTGTACGT 25450 Query 182543 GCTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATT 182602 ||||||||| || ||| | |||||||| ||||||||||| || |||||| |||||| Sbjct 25451 GCTTGTCCAACTGACGTACTTGAAATGGTACCTTGGGATGGATGTAAAGCAGGACAAATT 25510 Query 182603 GCTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCT 182662 ||||| ||||| | || || || ||||| || |||||| | |||||| ||||||| || Sbjct 25511 GCTTCTGCACCTCGTACAGAAGACTGTGTTGGTTGTAAGCGCTGTGAAGCAGCATGCCCA 25570 Query 182663 ACAGACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTA 182722 ||||||||||||||| |||| |||||| | || | ||||| ||| | || |||||||| Sbjct 25571 ACAGACTTTTTAAGTGTTCGAGTTTACCTTGGATCTGAAACAACACGTAGTATGGGTCTT 25630 Query 182723 GCATATTAA 182731 || || ||| Sbjct 25631 GCCTACTAA 25639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631427034250360