Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7 125 5e-24 seq12 114 9e-21 seq16 98.7 7e-16 >seq7 Length=519835 Score = 125 bits (138), Expect = 5e-24 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTA-AAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 ||||| ||| ||| ||| ||| | ||||| ||||||||||| | ||||| || || Sbjct 260589 AAAATCACGATGTTCTTTATAAAAAGTGACGGGCAAAACGATCACCTTGGAAGTGGAATC 260530 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||||| | || | | || ||||| ||||| ||||| | || || || Sbjct 260529 CTCGGACACCATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGCATCCCTCCTGA 260470 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| || || || ||||| ||||| | ||||||| ||||||||| | ||||| Sbjct 260469 CCAGCAGCGGTTGATCTTCGCCGGGAAACAGTTAGAAGACGGACGCACTTTGGCGGATTA 260410 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| |||||||||||||| ||||| || || ||| | || |||| || Sbjct 260409 TAACATTCAAAAAGAGTCCACGTTACACTTGGTGTTACGCCTGAGAGGCGG 260359 >seq12 Length=1122692 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23625 TAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAAT 23684 |||||| | || || ||||| ||||| |||||||| || ||| ||||||| | || | Sbjct 917154 TAAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAA 917095 Query 23685 ATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATT 23744 | ||| |||||| ||||| || || | ||||| || || ||||| || || || Sbjct 917094 CGTGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTT 917035 Query 23745 TGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTC 23804 ||||| ||||| | ||||||| | ||| | | ||||||||||| |||||||| || Sbjct 917034 CGCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATC 916975 Query 23805 CACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || || || | |||||||| || Sbjct 916974 AACCTTGCACTTGGTGTTGCGTTTGCGAGGCGG 916942 >seq16 Length=955652 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || ||||| ||||| | |||||||| || | Sbjct 707968 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTTGAGTCTTCC 707909 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| |||||| | ||||| ||||| Sbjct 707908 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707849 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || ||||| || || | ||||||| | || || | |||||||||| Sbjct 707848 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707789 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || || || || || || | ||| |||| || Sbjct 707788 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGG 707742 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || ||||| ||||| | ||||| || || | Sbjct 707512 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707453 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| |||||| | ||||| ||||| Sbjct 707452 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707393 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || ||||| || || | ||||||| | || || | |||||||||| Sbjct 707392 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707333 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || || || || || || | || ||||| || Sbjct 707332 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTACGAGGCGG 707286 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || ||||| ||||| | ||||| || || | Sbjct 707740 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707681 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| |||||| | ||||| ||||| Sbjct 707680 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707621 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || ||||| || || | ||||||| | || || | |||||||||| Sbjct 707620 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707561 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || || || || || || | ||| |||| || Sbjct 707560 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGG 707514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009513490668