Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 107 3e-18 >seq1 Length=1352724 Score = 107 bits (118), Expect = 3e-18 Identities = 445/702 (63%), Gaps = 0/702 (0%) Strand=Plus/Plus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||| || || ||||| || ||| || ||||| || || |||||||| || | Sbjct 25784 TTCAAACTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGT 25843 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| | || | ||| | |||| |||||| || | ||| |||| | | | ||| Sbjct 25844 CCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAA 25903 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 | || || | ||| |||||| || || |||||| | ||||| | || | Sbjct 25904 CAAGTCACGAGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAA 25963 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163 || ||||| ||||| ||||| || || || || | | | || || ||| || || Sbjct 25964 GATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCC 26023 Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223 || || | || || || |||| || | || | | ||| ||||| |||||||| || Sbjct 26024 TTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGA 26083 Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283 || || ||||| || ||| || | | ||||| || | ||| || | || Sbjct 26084 GGTACCGTTTGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACC 26143 Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || || || || ||| || || ||||| ||||| || ||||||||||| || Sbjct 26144 AATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTC 26203 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403 || ||| ||| ||||| || | ||| || || | ||| | | || || Sbjct 26204 AATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACC 26263 Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGT 78463 || || || || || || || || || || | ||| |||||| | | | || || Sbjct 26264 GGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGT 26323 Query 78464 TTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 |||| ||| ||| || ||| | || || || | | ||| | ||||||||| || Sbjct 26324 ATCAACAGCCTTTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGTG 26383 Query 78524 CTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 78583 ||| || | || || ||| | || ||||||||| || ||||||||||| Sbjct 26384 CTGCGGGCGCTCGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGTTTT 26443 Query 78584 AAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 |||||||| |||| ||| |||||| | ||||| | ||| Sbjct 26444 GAAACCAAAGTAGTCGTAATCAAAGTCACGGTCGTAGACAAT 26485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668617649440