Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq21 737 0.0 seq20 89.7 6e-13 >seq21 Length=72700 Score = 737 bits (816), Expect = 0.0 Identities = 753/978 (77%), Gaps = 6/978 (1%) Strand=Plus/Minus Query 183204 ATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCC 183263 |||||| || ||| | ||||| | || | || ||||| || | | ||||| || Sbjct 54058 ATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCC 53999 Query 183264 AACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGG 183322 || | || |||| || |||| |||||||| || ||| |||| |||||||| |||| Sbjct 53998 TACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGG 53940 Query 183323 ACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCT 183382 ||||||| || || || || || || |||| || || ||||| |||||||||||||||| Sbjct 53939 ACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 53880 Query 183383 CTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAG 183442 ||||||| || |||||| | || ||||| || |||||||||||||| || |||||||||| Sbjct 53879 CTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 53820 Query 183443 CAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACT 183502 |||| |||| ||||||||||| || |||||||| |||||||| || | || | |||| Sbjct 53819 CAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACT 53760 Query 183503 TCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTA 183562 || |||| || || | | |||||||||||||||||||| | || | |||| | || | Sbjct 53759 TCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAA 53700 Query 183563 TGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCC 183622 |||||||||||||| ||| ||||| || ||||| || |||||||| || || ||| Sbjct 53699 TGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCA 53640 Query 183623 TGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCA 183682 | | || || |||| || || ||||| ||| |||||||| || ||||| ||| | Sbjct 53639 TCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAA 53580 Query 183683 CCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 183742 | || |||| ||| | || ||||| || |||||||||||||| |||||||| ||||||| Sbjct 53579 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 53520 Query 183743 TGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 183802 |||| || || |||||||| ||||||||||| || ||| ||| ||||||||||| || | Sbjct 53519 TGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCG 53460 Query 183803 TTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862 | ||||| || || | |||||||| |||||| || ||| ||| || ||||||| Sbjct 53459 TAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGT 53400 Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922 |||| |||||||||||||| ||||||||||| |||||||| || ||||| || ||||| | Sbjct 53399 TCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTA 53340 Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982 ||||||| || ||||| || ||||| || ||||| || ||||||||||| ||| |||| Sbjct 53339 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGC 53280 Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042 | || | || |||||||| || ||||||||| || |||||||| || ||||| || | Sbjct 53279 CTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACG 53220 Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTCCTGAACACCTGGGC 184100 | || |||||||||||||| | | ||| |||| || ||||| | ||||| ||||| Sbjct 53219 GATTCAACTTCAACCAGTCAGTGGTAGAT--TCAAACGGACGTGTGATCAACACATGGGC 53162 Query 184101 AGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAA 184160 || || | ||||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct 53161 TGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 53102 Query 184161 CTTCCCTCTCGACCTTGC 184178 |||||| || ||||| || Sbjct 53101 CTTCCCACTTGACCTCGC 53084 Score = 600 bits (664), Expect = 1e-166 Identities = 751/1022 (73%), Gaps = 6/1022 (1%) Strand=Plus/Minus Query 185955 GGATGGTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGG 186014 || |||||||| | | |||||||||||||| || ||||| || || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 186015 TCTGGATTACTTCTTTTTCCCAC-TGCTTATATGGCAATTGGTGGCTGGCTTACTGGCAC 186073 |||||| | || || |||||| ||| || | ||| ||||||| ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 186074 AACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGA-GGGTGCTA 186132 ||| || || || ||||| || ||||| || || ||| |||||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TA 62311 Query 186133 ATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTAC 186192 | || ||||| ||||||| ||||| || | |||| |||| || || |||||||| | Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 186193 TTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGA 186252 ||||||| || || | ||||| || ||| || |||| |||||||| ||| | |||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 186253 ATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAA 186312 || || || || |||||||| |||| | || || || ||||| || || ||||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 186313 TCAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTG 186372 | |||| ||| || ||||||||||| || ||||| || || | || || |||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 186373 TCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCT 186432 | ||||| ||||||||| || ||||| ||||| || || |||||||| || || | Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 186433 CCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGA 186492 | ||||| || || | ||| || | || | | ||| ||||||| ||||||||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 186493 CGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAG 186552 | | || ||||||||||||||||| ||||| ||| | || |||| || || || | | Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 186553 CAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACAT 186612 |||| || || | |||||||| || || |||| |||||||| || ||||||||| Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 186613 TCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGAT 186672 || |||||| | | || |||| |||||| || || || ||||| || || ||| | | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 186673 TCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGC 186732 ||||||||||||| ||||| | || || || |||||||||||||| |||||||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 186733 TCTTTGTTCCTGTTA-TGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTT 186791 |||| || ||||||| ||||| | |||| || | |||| | | || | || ||| Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 186792 AACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTC 186851 ||||| ||||| || ||||| ||| || ||| | | || ||||| |||||||||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 186852 GAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCA 186911 || || ||||| || ||||| || || | || ||||| | ||||| ||||||||| | Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 186912 GTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCT 186971 ||||| || ||||||||| ||||||| ||||| || || | ||| | || |||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 186972 CT 186973 || Sbjct 61471 CT 61470 >seq20 Length=43614 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 |||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||| Sbjct 33397 TAGCTCAGTTGGATAGAGCACCAGCCTTCTAAGCTGTTGGTCACAGGTTCGAGTCCTGT 33455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622070236706520