Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq16 134 3e-26 seq17 120 7e-22 seq12 116 9e-21 seq7 114 3e-20 >seq16 Length=955652 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| || ||||||||||||||||| || ||||| || ||||||| || ||| Sbjct 707316 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707375 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | |||||| |||| || ||| |||||||| ||||| || || ||| Sbjct 707376 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707435 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | |||| ||| ||| ||||| | || || |||||||| || | |||| Sbjct 707436 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707495 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| ||||| Sbjct 707496 TTGACGAAGATTTGCAT 707512 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| || ||||||||||||||||| || ||||| || ||||||| || ||| Sbjct 707544 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707603 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | |||||| |||| || ||| |||||||| ||||| || || ||| Sbjct 707604 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707663 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | |||| ||| ||| ||||| | || || |||||||| || | |||| Sbjct 707664 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707723 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| ||||| Sbjct 707724 TTGACGAAGATTTGCAT 707740 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 |||||||| || ||||||||||||||||| || ||||| || ||||||| || ||| Sbjct 707772 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707831 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | |||||| |||| || ||| |||||||| ||||| || || ||| Sbjct 707832 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707891 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | |||| ||| ||| ||||| | || || |||||||| || | |||| Sbjct 707892 ACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707951 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| ||||| Sbjct 707952 TTGACGAAGATTTGCAT 707968 >seq17 Length=937610 Score = 120 bits (132), Expect = 7e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || |||||||| ||||| || ||||||||||||| |||||||||| ||| ||| Sbjct 351355 GTGGATTCTTTTTGAATGTTATAGTCGGCTAAAGTTCGGCCATCTTCTAATTGTTTTCCG 351414 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | | |||||| |||| || ||| || || || ||||| ||||| ||| Sbjct 351415 GCGAAGATCAATCGCTGCTGATCCGGCGGGATGCCCTCTTTGTCTTGGATTTTCGCCTTG 351474 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAG 152083 || | || | |||| ||| ||| ||||| || || || || ||||||||||| Sbjct 351475 ACGTTGTCGATAGTGTCCGAAGACTCGACTTCGAGGGTGATCGTCTTGCCCGTGAG 351530 >seq12 Length=1122692 Score = 116 bits (128), Expect = 9e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || |||||||||||||||||||| || | ||||||||| ||||||| ||| ||| Sbjct 916972 GTTGATTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAACTGTTTACCG 917031 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | ||||||||||| || || || ||||| ||||||||||| ||| Sbjct 917032 GCGAAAATCAATCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCTTGAATTTTCGCTTTC 917091 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| || ||| ||||| || || || ||||| || || | ||| Sbjct 917092 ACGTTGTCGATCGTGTCCGAGGACTCGACTTCGAGCGTGATGGTTTTCCCAGTCAAAGTT 917151 Query 152088 TT 152089 || Sbjct 917152 TT 917153 >seq7 Length=519835 Score = 114 bits (126), Expect = 3e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||||||||| ||||| ||||| || ||||| | || ||||||| ||||||| Sbjct 260389 GTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCTTCTAACTGTTTCCCG 260448 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | || ||||||||| | | ||| |||||||| ||||| ||||| ||| Sbjct 260449 GCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATTTTCGCCTTG 260508 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || | || | | |||| || || ||||| | || || ||||||||||| Sbjct 260509 ACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGTTTTGCCCGT 260561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820489550091