Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq21 789 0.0 seq15 84.2 3e-11 >seq21 Length=72700 Score = 789 bits (874), Expect = 0.0 Identities = 770/992 (78%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402 |||| || || ||| ||| | || || ||||| |||||| | || |||| |||||| Sbjct 54075 TGGGGACGTTTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTC 54016 Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462 || || | |||||||| | | |||| || || |||||| | || |||||| Sbjct 54015 GGTGTATTAATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATC 53956 Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522 | ||||| || ||||||||||| || || || || || || |||| || || ||||| Sbjct 53955 GCAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTAC 53896 Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582 || ||||||||||||||||||||||| || || | || ||||| ||||| ||||||||| Sbjct 53895 GGAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTC 53836 Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642 || || |||||||||||||| | || ||||| ||| | ||||||||||| |||| ||| Sbjct 53835 TACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAG 53776 Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702 || | || | |||||| ||||||| | | | | |||||||||||||||||||| | Sbjct 53775 CTTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTT 53716 Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762 || | ||| | || ||||| ||||||||| ||| |||||||||||||| || || || Sbjct 53715 TCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCT 53656 Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822 || | || || ||| | | ||||| | || || || || |||||||||| ||||||| Sbjct 53655 GCAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCT 53596 Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882 || ||||| || ||||| || |||| |||| | || ||||| ||||||||||||||||| Sbjct 53595 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 53536 Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942 |||||||| |||||||||||||| || || || || || ||||| || || || || Sbjct 53535 ATGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCT 53476 Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002 ||||||||| ||||| ||||| ||| |||||||||| || |||||||| || Sbjct 53475 ATGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCT 53416 Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062 ||| || ||||||||||| |||||||||||||| |||||||| || || ||||||||| Sbjct 53415 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGT 53356 Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122 |||||||| || || ||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct 53355 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 53296 Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182 |||||||| |||||||| | || ||||||||||| ||||||||| | || || ||| Sbjct 53295 TTCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATG 53236 Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242 || |||||||| ||||| ||||||||||||||||| | | ||| | || |||||| Sbjct 53235 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTG 53176 Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302 ||||||| ||||| || || | ||||||||| ||||| |||||||| ||||||||| Sbjct 53175 ATCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAG 53116 Query 170303 CGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334 ||||| |||||||||||||| || |||||||| Sbjct 53115 CGTAACGCTCACAACTTCCCACTTGACCTCGC 53084 Score = 632 bits (700), Expect = 2e-176 Identities = 762/1029 (74%), Gaps = 8/1029 (1%) Strand=Plus/Minus Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648 || |||||||| | | |||||||||||||| ||||| || || ||||| || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 170649 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCAC 170707 ||||||||| || || |||||| ||| || ||||| |||| || |||||||| || || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 170708 GACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAA 170767 ||||| || || |||||||| ||||| | |||||||| ||||||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 170768 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 170827 ||||| || | || || |||||||| | | || |||| || || |||||||| || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 170828 TTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887 |||||| || || | || || || ||| ||| |||| |||||||| ||| | |||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947 || || || || |||||||| |||| | || || || |||||||| || |||||||| Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 170948 CAGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007 |||| ||| ||| | || ||||| || || || ||||| | || || ||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067 |||||| || ||||| || || || |||||||| ||| |||||||||| ||||| || Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127 ||||| || || | ||| ||||| || | || ||| | |||||||||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 171128 ACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGC 171187 ||| || ||||| || |||||||| || || ||| | ||||| | ||| | |||| ||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 171188 AATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTT 171247 |||||| || | || |||||||| || | | |||||||||||| ||||||| || Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 171248 TAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTT 171307 ||||| || | ||||| | |||||||| || || ||||| || ||||| ||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 171308 CTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCT 171367 |||||| |||||||| ||| | || ||| || ||||||||| | || ||||| ||||| Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 171368 GTTTGTTCCTGTCA-TGGGTCTTTGG--GTCAGTAGTCTGGGGATTATTGGTCTTGCTCT 171424 || || ||||| | ||||| | ||| ||||| | || || | | || | || || Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCA--CTTGGAGTAGTAGGATTAGCACT 61653 Query 171425 TAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTT 171484 ||| || | || || || |||||| || ||| || | || ||||||||||| ||||| Sbjct 61652 TAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTT 61593 Query 171485 CGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACC 171544 ||| || ||||| || |||||||| || | || ||||| | ||||||||||||||| | Sbjct 61592 CGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGC 61533 Query 171545 AGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGC 171604 ||| || || ||||||||| |||| ||||| ||||| || || || ||||| || || Sbjct 61532 TCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 61473 Query 171605 ACTTTGATT 171613 |||| ||| Sbjct 61472 TCTTTAATT 61464 >seq15 Length=989707 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 167448 TACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGCCGTGCAGGC 167507 ||| | || ||||||||||| ||||| || | ||| | ||||| ||| | || ||| Sbjct 286969 TACGTTCTCGACGCGGCTGAAGAAGCTGGCATTGACTTGCCGTACTCCTGCAGAGCGGGC 287028 Query 167508 GCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGCGATCAATCC 167567 || || || ||||||||||| || | || | || ||| | || ||| ||| |||||| Sbjct 287029 GCGTGCTCTTCGTGCGCGGGTAAGGTTGTCGCGGGTACCATCGACCAATCCGACCAATCC 287088 Query 167568 TTCCTGGACGATGATCAAA 167586 ||| ||||||| || |||| Sbjct 287089 TTCTTGGACGACGACCAAA 287107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592198244547920