Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq16 141 7e-29 seq12 82.4 5e-11 >seq16 Length=955652 Score = 141 bits (156), Expect = 7e-29 Identities = 175/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| | |||||||| ||| | ||| |||||| ||||||||||| Sbjct 707507 TTGCATCCCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTA 707566 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| | ||| || |||| || | |||||| ||||| || ||||| ||||||||| Sbjct 707567 ATCGGCCAACGTTCT-GC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGA 707624 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 || | || | ||||||||| || |||||| ||| | | | |||||||||| Sbjct 707625 TCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAA 707684 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||| ||| || || || || || | ||||| |||||||||||||| Sbjct 707685 GACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 141 bits (156), Expect = 7e-29 Identities = 175/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| | |||||||| ||| | ||| |||||| ||||||||||| Sbjct 707735 TTGCATCCCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTA 707794 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| | ||| || |||| || | |||||| ||||| || ||||| ||||||||| Sbjct 707795 ATCGGCCAACGTTCT-GC-CGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGA 707852 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 || | || | ||||||||| || |||||| ||| | | | |||||||||| Sbjct 707853 TCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAA 707912 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||| ||| || || || || || | ||||| |||||||||||||| Sbjct 707913 GACTCAACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 131 bits (144), Expect = 1e-25 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCG 44182 |||||||| ||| | ||| |||||| ||||||||||||||||| | ||| || || Sbjct 707300 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCT-GC-CG 707357 Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || | |||||| ||||| || ||||| ||||||||||| | || | ||||||||| Sbjct 707358 TCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTG 707417 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || |||||| ||| | | | |||||||||| || || || |||| ||| || Sbjct 707418 TCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATG 707477 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | ||||| |||||||||||||| Sbjct 707478 GTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/122 (77%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| | |||||||| ||| | ||| |||||| ||||||||||| Sbjct 707963 TTGCATCCCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTA 708022 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| | ||| | |||| || | |||||| ||||| || ||||| ||||||||| Sbjct 708023 ATCGGCCAACGTT--CTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGA 708080 Query 44222 TC 44223 || Sbjct 708081 TC 708082 >seq12 Length=1122692 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/203 (71%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTG-AAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 || |||| || | |||||||| ||| ||| || | || ||||||||||||||||| || Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGAT-TCTTTTTGGATGTTGTAATCCGC 917000 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| | | |||| || | ||| || ||||| || ||||| |||||||| || | || Sbjct 917001 GAGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGG 917060 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCA 44288 | || ||||| || || ||| |||| | ||| | || ||||| | ||| || | Sbjct 917061 AATGCCCTCCTTGTCTTGAATTTTC-GCTTTCACGTTGTCGATCGTGTCCGAGGACTCGA 917119 Query 44289 CCTCCACCGTAATCGTCTTTCCC 44311 | || | ||| || || |||||| Sbjct 917120 CTTCGAGCGTGATGGT-TTTCCC 917141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990307864957