Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 seq17 82.4 7e-11 >seq7 Length=519835 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | || |||||||||| || | |||| ||| || ||||||||||| || | Sbjct 260359 CCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCC 260418 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| || | ||| || |||||||| |||| ||||| ||||| | || Sbjct 260419 AAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGG 260478 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || |||| || | ||| | | | ||||| || ||||| Sbjct 260479 ATGCCTTCCTTGT-CTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCAC 260537 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 |||| || |||||||| ||||||| Sbjct 260538 TTCCAAGGTGATCGTTTTGCCCGTCA 260563 >seq17 Length=937610 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| | ||| || |||| |||| ||| || || |||||||||||||||| Sbjct 351324 GCCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGC 351383 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || | || || | || || |||||||| |||| ||||| || |||| || Sbjct 351384 TAAAGTTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGG 351443 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||| |||| | || |||| || | ||| | | | |||||| ||||| | Sbjct 351444 GATGCCCTCTTTGT-CTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGA 351502 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGC 41842 | || | || ||||| || ||||| ||| Sbjct 351503 CTTCGAGGGTGATCGTCTTGCCCGTGAGC 351531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303878645200