Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq70 113 5e-20 seq97 102 8e-17 >seq70 Length=28206 Score = 113 bits (124), Expect = 5e-20 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || ||||||||||||||||| || ||||| | ||||| | ||||||||||||||||| Sbjct 6616 CACGCGAAATCGCAATGTAACCCTTCGTCGCGACTGATCAACTCGTTAGAAAATGTCAAG 6675 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAA--CGACCCAGAAAAGA 17081 || |||| |||| |||||||||||||| || ||| ||| | | | |||| | Sbjct 6676 CCTTTCATCAACCCTCTCTTCTTTAACCAAAAGATGGCGCAGAAACTGCCGCTGAAA--A 6733 Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG-CGTCTTTGTTA 17140 | || || || ||| | || ||| ||| ||| ||||||||| || ||| || | | Sbjct 6734 AAATCCCTTCCACGCACGCGAACCCGACTAAACGTTCGGCGAACCTCGCCGAGGGGGATT 6793 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT 17169 | |||||||||| | |||| || ||||| Sbjct 6794 C-AATCCATTTCATCGCCCAATCCGCTTT 6821 >seq97 Length=23129 Score = 102 bits (112), Expect = 8e-17 Identities = 178/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 119781 ATTTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCC 119840 || |||| || || || |||||||||||| || || |||||| || |||||| | | Sbjct 22345 ATGTCATGTACCGAATTTTTCCGAACACGTCGCGCTCTTTCCACCCTTGGTCGTGCACGC 22286 Query 119841 CCGCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATT 119900 | | | || ||| | |||||| ||||| ||| | ||||| |||| || | | | Sbjct 22285 CGACGATGGACCACATGCATCCAACGTAACCGCTCGGATCTCTTCCGTCGAGCGACCAGC 22226 Query 119901 TATCGTTTAAGTAGATACAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTA 119960 |||||| || ||| | | || || |||| ||||| ||| |||||||| | Sbjct 22225 GATCGTTCAAAGCGATGGCGTATTTCAAAGCGTTTTCGGGAGTATCGGACCATTCCAAGA 22166 Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020 |||| || ||||| ||||| || | | |||| ||||||||||| | ||| | | Sbjct 22165 TTTTCTTTGCCCAATACATGCGCATGAATCCGTGCATTTTACCACCGTAAACGAGCTCGC 22106 Query 120021 GTTGTGCGGCGTTCCATAA 120039 |||| || ||||||||||| Sbjct 22105 GTTGCGCAGCGTTCCATAA 22087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517531897980240