Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq64 122 1e-22 >seq64 Length=29840 Score = 122 bits (134), Expect = 1e-22 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||| ||||| ||||| ||| ||| ||||| || |||||||| || Sbjct 4668 CCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCG 4727 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | |||| |||| || ||||| || || || | |||||||||||| | ||| Sbjct 4728 AGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGG 4787 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||| | ||| |||| | || ||| | | | |||||| || || || Sbjct 4788 ATGCCCTCCTTGT-CTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGAC 4846 Query 43136 ATCGACCGTGATGGTTTTGCCCGT 43159 |||| ||||||||||| ||||| Sbjct 4847 TTCGAGAGTGATGGTTTTCCCCGT 4870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571802461129040