Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq64 100 2e-16 seq277 84.2 2e-11 >seq64 Length=29840 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 |||||||||||||||| || |||||||||| |||| ||| || || |||||||| || Sbjct 4666 CGCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCG 4725 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 || | |||| || | |||||| ||||| || ||||| ||||| ||||| || | Sbjct 4726 CGAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCG 4785 Query 45228 GCACACCCTCCTTGTCCGCAATTTT 45252 | | ||||||||||| |||||| Sbjct 4786 GGATGCCCTCCTTGTCTTGAATTTT 4810 >seq277 Length=9178 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| |||| ||| | | || ||||||||||| ||||| || |||||||| || Sbjct 8065 GCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGC 8124 Query 45169 CA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || ||| || |||| |||| ||| || |||||||||||||||||||||||||| || Sbjct 8125 CAACGTT--CGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGG 8182 Query 45227 GGCACACCCTCCTTGTC 45243 || | || || ||||| Sbjct 8183 GGGATCCCTTCTTTGTC 8199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395065001874478