Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq277 87.8 2e-12 >seq277 Length=9178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || ||||| | | |||||| || || || |||||||| ||||||||||| ||| Sbjct 8066 CCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 8125 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || |||| |||| |||| ||||| ||| || | || || ||||| || ||| || Sbjct 8126 AACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGG 8185 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||| ||||| || ||| ||||| | || ||||||| ||||||| | Sbjct 8186 ATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCACC 8245 Query 48680 TCGACTGTTATGGTTTTACCGGT 48702 || | ||||| ||||| || || Sbjct 8246 TCCAACGTTATCGTTTTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421240326190118