Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq70 87.8 2e-12 >seq70 Length=28206 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || || ||||| ||||| || ||||| || | ||| || || || ||||||||||| || Sbjct 6616 CACGCGAAATCGCAATGTAACCCTTCGTCGCGACTGATCAACTCGTTAGAAAATGTCAAG 6675 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGC---AAATGCTCCTGAAAAG 21592 || ||| || |||||||| ||||||||||| | || ||| || ||| |||||| Sbjct 6676 CCTTTCATCAACCCTCTCTTCTTTAACCAAAAGA-TGGCGCAGAAACTGCCGCTGAAA-- 6732 Query 21593 AAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 ||||| || || ||| || || | ||||| ||||| Sbjct 6733 AAAATCCCTTCCACGCACGCGAACCCGACTAAACGTTC 6770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531886717926320