Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq64 98.7 9e-16 seq277 89.7 4e-13 >seq64 Length=29840 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24006 AAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAA 24065 ||||| || || || ||| | || || ||||||||||| | ||||| ||||| | Sbjct 4879 AAAACTTTGACGGGGAAAACCATCACTCTCGAAGTCGAGTCTTCGGACACGATCGACAAC 4820 Query 24066 GTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTAC 24125 || ||| || ||| ||||| || ||||| || || || || ||| || |||||| Sbjct 4819 GTGAAAGCGAAAATTCAAGACAAGGAGGGCATCCCGCCGGACCAGCAGCGATTGATTTTT 4760 Query 24126 GGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCT 24185 | ||| || ||| | ||||| | |||| || ||||| ||||| |||||||| || Sbjct 4759 GCCGGTAAACAATTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAGTCC 4700 Query 24186 ACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || | || || || || ||||||||||| || Sbjct 4699 ACGTTGCACTTGGTTTTGAGATTGAGAGGTGG 4668 >seq277 Length=9178 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24006 AAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAA 24065 ||| || | ||||| ||| |||| || | || || ||| | ||| || ||||| | Sbjct 8277 AAATCAGTGACTGGCAAAACGATAACGTTGGAGGTGGAGTCTTCCGATACGATCGATAAC 8218 Query 24066 GTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTAC 24125 ||||| ||||| ||||||||||| || || || || |||||| | |||| | | Sbjct 8217 GTCAAGGCGAAGATCCAAGACAAAGAAGGGATCCCCCCGGACCAACAGCGGTTGATATTC 8158 Query 24126 GGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATC 24184 | ||| |||||| | ||||| | | ||||| || ||||| ||||| ||||| ||||| Sbjct 8157 GCCGGGAAGCAATTGGAAGACGGGCG-AACGTTGGCGGATTACAACATCCAAAAGGAATC 8099 Query 24185 TACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || | || |||||| | | ||| |||| || Sbjct 8098 GACGCTGCACTTAGTGCTGCGTTTGCGAGGCGG 8066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429924902008290