Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq64 93.3 4e-14 seq277 86.0 5e-12 >seq64 Length=29840 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 114154 TACCGCCACGT---AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||||||||| | | ||||||||| || || | ||| || |||||||| |||||||||| Sbjct 4663 TACCGCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAAT 4722 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | ||| | ||||| | ||||||||| || | || | ||||| ||||||| Sbjct 4723 CCGCGAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCG 4782 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 | || ||||| || ||||| ||| || ||| | | || | ||||| | || | Sbjct 4783 GCGGGATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACT 4842 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTT 114367 |||| || | || | ||||| || |||| |||||| Sbjct 4843 CGACTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || | | || ||||| || | ||| ||||| ||||| ||||||||||| | Sbjct 8066 CCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 8125 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||||| | ||| || || ||| | || | |||||||||||||| || Sbjct 8126 AACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGG 8185 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| ||||| || | | || | || |||| || || || Sbjct 8186 ATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCACC 8245 Query 114336 TCCACGGTCACCGTTTTGCCGGTCA 114360 |||| || | ||||||||| |||| Sbjct 8246 TCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420123555018216