Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq330 95.1 2e-14 seq329 95.1 2e-14 seq327 95.1 2e-14 seq114 95.1 2e-14 >seq330 Length=7938 Score = 95.1 bits (104), Expect = 2e-14 Identities = 291/444 (66%), Gaps = 7/444 (2%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| ||| | |||| || || || |||||| ||||||||||| || ||| | ||| Sbjct 3877 TTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTTTCCGGCTCTTTC 3936 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||| ||| ||| | |||||| || || |||||||| || || Sbjct 3937 TGCTCCATCTACTGGCTCAAGAAGAGAGGCAT-GATGCCGGGGCTTACCTTCTCCAATGA 3995 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | ||| ||| || || || |||| || || || || ||| | || | | | | Sbjct 3996 GTTGATCTCCAGAGATGAAGGTTTGCACAGAGATTTCGCGTGCTTGCTTTACACTA---T 4052 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | ||| ||| | || | | || | || || || || ||||| Sbjct 4053 GTTAAACAACACGCCGGGTGAAGAAAAATTGAGAAAGATTGTTACCGAAGCGGTTGAGAT 4112 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||||||||| | | || |||| ||| | || ||||| |||||| |||| Sbjct 4113 TGAGAAGGAGTTTGTGTGCGATGCGTTGCCATGTG-CGCTTGTCGGTATGAACGCCGACA 4171 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| | | |||||| |||| || ||||| || | || | ||| | || || Sbjct 4172 TGATGAGAGATTACATCGAGTATGTTGCCGATCACTTGCTCTCGCAGCTCGGCTTCGCGA 4231 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 || ||||| || ||| || |||| ||||| ||||| ||| | ||||||| Sbjct 4232 AGGAATATAACACCGCGAACCCGTTTGACTGGATGGAATTGATCTCCTTGCAAGGCAAGA 4291 Query 43111 CCAACTTTTTCGAGAAGCGCGTCG 43134 | ||||| || |||||||| |||| Sbjct 4292 CGAACTTCTTTGAGAAGCGTGTCG 4315 >seq329 Length=7938 Score = 95.1 bits (104), Expect = 2e-14 Identities = 291/444 (66%), Gaps = 7/444 (2%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| ||| | |||| || || || |||||| ||||||||||| || ||| | ||| Sbjct 3877 TTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTTTCCGGCTCTTTC 3936 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||| ||| ||| | |||||| || || |||||||| || || Sbjct 3937 TGCTCCATCTACTGGCTCAAGAAGAGAGGCAT-GATGCCGGGGCTTACCTTCTCCAATGA 3995 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | ||| ||| || || || |||| || || || || ||| | || | | | | Sbjct 3996 GTTGATCTCCAGAGATGAAGGTTTGCACAGAGATTTCGCGTGCTTGCTTTACACTA---T 4052 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | ||| ||| | || | | || | || || || || ||||| Sbjct 4053 GTTAAACAACACGCCGGGTGAAGAAAAATTGAGAAAGATTGTTACCGAAGCGGTTGAGAT 4112 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||||||||| | | || |||| ||| | || ||||| |||||| |||| Sbjct 4113 TGAGAAGGAGTTTGTGTGCGATGCGTTGCCATGTG-CGCTTGTCGGTATGAACGCCGACA 4171 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| | | |||||| |||| || ||||| || | || | ||| | || || Sbjct 4172 TGATGAGAGATTACATCGAGTATGTTGCCGATCACTTGCTCTCGCAGCTCGGCTTCGCGA 4231 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 || ||||| || ||| || |||| ||||| ||||| ||| | ||||||| Sbjct 4232 AGGAATATAACACCGCGAACCCGTTTGACTGGATGGAATTGATCTCCTTGCAAGGCAAGA 4291 Query 43111 CCAACTTTTTCGAGAAGCGCGTCG 43134 | ||||| || |||||||| |||| Sbjct 4292 CGAACTTCTTTGAGAAGCGTGTCG 4315 >seq327 Length=7986 Score = 95.1 bits (104), Expect = 2e-14 Identities = 291/444 (66%), Gaps = 7/444 (2%) Strand=Plus/Minus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| ||| | |||| || || || |||||| ||||||||||| || ||| | ||| Sbjct 4110 TTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTTTCCGGCTCTTTC 4051 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||| ||| ||| | |||||| || || |||||||| || || Sbjct 4050 TGCTCCATCTACTGGCTCAAGAAGAGAGGCAT-GATGCCGGGGCTTACCTTCTCCAATGA 3992 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | ||| ||| || || || |||| || || || || ||| | || | | | | Sbjct 3991 GTTGATCTCCAGAGATGAAGGTTTGCACAGAGATTTCGCGTGCTTGCTTTACACTA---T 3935 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | ||| ||| | || | | || | || || || || ||||| Sbjct 3934 GTTAAACAACACGCCGGGTGAAGAAAAATTGAGAAAGATTGTTACCGAAGCGGTTGAGAT 3875 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||||||||| | | || |||| ||| | || ||||| |||||| |||| Sbjct 3874 TGAGAAGGAGTTTGTGTGCGATGCGTTGCCATGTG-CGCTTGTCGGTATGAACGCCGACA 3816 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| | | |||||| |||| || ||||| || | || | ||| | || || Sbjct 3815 TGATGAGAGATTACATCGAGTATGTTGCCGATCACTTGCTCTCGCAGCTCGGCTTCGCGA 3756 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 || ||||| || ||| || |||| ||||| ||||| ||| | ||||||| Sbjct 3755 AGGAATATAACACCGCGAACCCGTTTGACTGGATGGAATTGATCTCCTTGCAAGGCAAGA 3696 Query 43111 CCAACTTTTTCGAGAAGCGCGTCG 43134 | ||||| || |||||||| |||| Sbjct 3695 CGAACTTCTTTGAGAAGCGTGTCG 3672 >seq114 Length=19556 Score = 95.1 bits (104), Expect = 2e-14 Identities = 291/444 (66%), Gaps = 7/444 (2%) Strand=Plus/Plus Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| ||| | |||| || || || |||||| ||||||||||| || ||| | ||| Sbjct 3877 TTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTTTCCGGCTCTTTC 3936 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||| ||| ||| | |||||| || || |||||||| || || Sbjct 3937 TGCTCCATCTACTGGCTCAAGAAGAGAGGCAT-GATGCCGGGGCTTACCTTCTCCAATGA 3995 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | ||| ||| || || || |||| || || || || ||| | || | | | | Sbjct 3996 GTTGATCTCCAGAGATGAAGGTTTGCACAGAGATTTCGCGTGCTTGCTTTACACTA---T 4052 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | ||| ||| | || | | || | || || || || ||||| Sbjct 4053 GTTAAACAACACGCCGGGTGAAGAAAAATTGAGAAAGATTGTTACCGAAGCGGTTGAGAT 4112 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACC 42990 ||||||||||| | | || |||| ||| | || ||||| |||||| |||| Sbjct 4113 TGAGAAGGAGTTTGTGTGCGATGCGTTGCCATGTG-CGCTTGTCGGTATGAACGCCGACA 4171 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCC 43050 | ||| | | |||||| |||| || ||||| || | || | ||| | || || Sbjct 4172 TGATGAGAGATTACATCGAGTATGTTGCCGATCACTTGCTCTCGCAGCTCGGCTTCGCGA 4231 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 || ||||| || ||| || |||| ||||| ||||| ||| | ||||||| Sbjct 4232 AGGAATATAACACCGCGAACCCGTTTGACTGGATGGAATTGATCTCCTTGCAAGGCAAGA 4291 Query 43111 CCAACTTTTTCGAGAAGCGCGTCG 43134 | ||||| || |||||||| |||| Sbjct 4292 CGAACTTCTTTGAGAAGCGTGTCG 4315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944314198619680