Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq277 89.7 4e-13 seq97 87.8 1e-12 >seq277 Length=9178 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || |||||||| | || ||||| ||||| || ||||||||||| ||| Sbjct 8066 CCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 8125 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || |||| |||| ||||||||||| ||||| ||||||| ||||| || ||| Sbjct 8126 AACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCC 8179 >seq97 Length=23129 Score = 87.8 bits (96), Expect = 1e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886 |||||||| || |||||||| || ||| |||| || || ||||| ||||| Sbjct 22075 ACGCACGACAATTTATGGAACGCTGCGCAACGCGAGCTCGTTTACGGTGGTAAAATGCAC 22134 Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC 37946 | ||||||||||||||| |||||||| ||||||||||| ||| | | | | | Sbjct 22135 GGATTCATGCGCATGTATTGGGCAAAGAAAATCTTGGAATGGTCCGATACTCCCGAAAAC 22194 Query 37947 GCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAAC 38006 || | || |||||||| | | || ||| | | ||||| | ||||| | | Sbjct 22195 GCTTTGAAATACGCCATCGCTTTGAACGATCGCTGGTCGCTCGACGGAAGAGATCCGAGC 22254 Query 38007 GGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATT 38066 |||||||| || || ||||||| || ||| | ||||| || ||| ||| Sbjct 22255 GGTTACGTTGGATGCATGTGGTCCATCGTCGGCGTGCACGACCAAGGGTGGAAAGAGCGC 22314 Query 38067 CCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAA 38122 | | | ||| || ||||||||||||| |||| ||| || | | ||| ||||| Sbjct 22315 GACGTGTTCGGAAAAATTCGGTACATGACATACAGCGGTTGCGAGAAGAAATTTAA 22370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397052150578636