Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq51 120 7e-22 seq64 114 3e-20 >seq51 Length=33875 Score = 120 bits (132), Expect = 7e-22 Identities = 303/461 (66%), Gaps = 0/461 (0%) Strand=Plus/Minus Query 325136 TTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGATACCACTCGATCCATTCACCAGG 325195 ||||| | ||||| || |||||||| || |||||||| | || || | || Sbjct 7233 TTGTAGTTTGGAATCGAAGTGGACCATCCCGTCCCGATACCTTCGGCGCCGTTAATCAAA 7174 Query 325196 ATACTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTATCGCCGTCGTCGTACATA 325255 | | | |||||||| |||| |||||| | ||||| ||||| | || || || | | Sbjct 7173 ACAGTTGGAATAACCGGCATGTAATACGCCGGTTCAATCTTCTGACCATCTTCATCGTTG 7114 Query 325256 TATTTCAGAAGATTGTCGTCCGTATCGACGAAAACCTGTCGAGTCTGAGGGTTCAGTTTC 325315 ||||||| | | |||||| || ||| || || ||| | || | Sbjct 7113 TATTTCAACAAAGCGTCGTCGCATTCAGGGAATACAACTCTGGTCAACTGCGCCAAACGC 7054 Query 325316 atatatatatatCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 325375 || | || || || | ||| || ||||| || || ||||| | || ||| || || Sbjct 7053 GTAAAAATGTAACGCGGCGACGCATGGTCCTTCCCGCCTTGCAAACGCGTACCAAATTGA 6994 Query 325376 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 325435 || ||| | ||| |||| ||||| || | || || | || || || || || || Sbjct 6993 CCGCTCGGGACTAACAAGTTTATGTTGTTCGTCCCAACGAAGTCTTGCGCGAGATTGACA 6934 Query 325436 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCG 325495 || || ||||| ||||| || ||||||||||| ||| || | ||||||||| Sbjct 6933 ATTGTGGACGCGAGAGACGCTTCACCGTGGTGATAGGCTGAATGTTCCGAGACGTAACCG 6874 Query 325496 CTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACT 325555 || || || ||||| || | ||| | | | || || | |||||| ||| | || ||| Sbjct 6873 CTCAATTGCGCAACTTTGATGTCTGACTTTAACTTTCTCTTGAAGCACGAAAACATAACT 6814 Query 325556 TTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAAT 325596 || ||||| ||||||||||| ||||| | | | || ||||| Sbjct 6813 TTTCGTTGCGAAGGTTTGAAGCCATCGATGGCGGATGGAAT 6773 >seq64 Length=29840 Score = 114 bits (126), Expect = 3e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || || || ||||| || | ||||||||||||||||| || || || Sbjct 4704 TCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAA 4763 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| || ||||| || || || || || ||||||||||||||||| Sbjct 4764 ATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTG 4823 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || || || |||||||| ||||| || ||||| |||| ||| || Sbjct 4824 TCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179622387866004