Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 156 4e-33 >seq11 Length=57886 Score = 156 bits (172), Expect = 4e-33 Identities = 479/741 (65%), Gaps = 0/741 (0%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||| |||||||||| || || || || ||| | || ||||| || |||| Sbjct 12427 CCAACCTTGTTCAACGCTGGTACACCTCGACCGCAGCTCTCCTCGTGCTTTTTGATTTGC 12368 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||||| || || | ||||| | ||||| || ||| ||| || Sbjct 12367 ATGAAGGAAGACTCCATTGAAGGTATCTACGACACGTTGAAGGAGTGCGCGTGCATTTCC 12308 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | ||| || || ||||| | | |||||| | ||||||| | ||| || ||| Sbjct 12307 AAGTCCGCCGGTGGTATCGGTTTGTCCATTCACGACATCCGTGCCACGTCTTCGTATATC 12248 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 | || || || || || || ||||| | | || ||||| ||||| |||||| || | Sbjct 12247 AGAGGCACAAACGGTACTTCGAACGGTATTATTCCGATGCTTCGGGTGTTCAACGACACA 12188 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 ||| | || |||||||| || || || | | | ||||| |||| || |||||||||| Sbjct 12187 GCGAGGTATGTGGACCAAGGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATCTATCTCGAA 12128 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| ||||| | | | |||| || |||||||||||||||| || Sbjct 12127 CCATGGCACTCGGACATCTTCGACTGGCTCGATTTGAGAAAGAACCACGGCAAGGAAGAA 12068 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | || || | ||| | || |||| | ||| | || | || |||||| | ||| Sbjct 12067 GCTAGAGCTCGTGACTTGTTTTACGGCTTGTGGACGAACGATTTGTTCATGAAAAGAGTC 12008 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 || ||||| | |||| || | || || || || || || || ||||||| Sbjct 12007 GAAGAAAACGGCAAGTGGACACTGATGTGCCCGAACGAGTGCCCGGGTTTGTCCGAATGC 11948 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 || || || |||| |||| | |||||| | ||||| || |||| Sbjct 11947 TGGGGTGAAGAATTCGAAGCTCTGTACACCAAGTACGAAAGAGAAAACAAGGGCAAGAAG 11888 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 || |||| | |||| ||| | || | || | || ||||| || || | Sbjct 11887 ACAATTAATGCCCAGCAGCTTTGGTTTGCTATTCTCGAAGCGCAAGTGGAAACTGGCAAC 11828 Query 94498 CCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 || ||||| ||||| ||||| | |||| |||||| ||||| || | | || | Sbjct 11827 CCATACATGTTGTTTAAGGATGCGTGCAACCGCAAGTCAAACCAACAAAATTTAGGCACG 11768 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||||| || || |||| || ||||| ||||| || ||||| || || || | || Sbjct 11767 ATCAAATCGTCCAACTTGTGTACAGAGATCGTCGAATACACTTCACCAGAAGAAACCGCC 11708 Query 94618 GTGTGTAACCTGGGCTCCATC 94638 || || ||| ||| |||||| Sbjct 11707 GTTTGCAACTTGGCATCCATC 11687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494710102203280