Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq277 111 2e-19 seq64 95.1 1e-14 >seq277 Length=9178 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||||||||||||||||| ||||| || | | || |||||||| |||||||| || Sbjct 8065 GCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGC 8124 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || ||| ||| || | ||| || |||| | || | |||||||||||||| || Sbjct 8125 CAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGG 8184 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| || || | | || | || |||| |||||||| Sbjct 8185 GATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCAC 8244 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCA 138592 ||| | ||| | |||||| ||||||| Sbjct 8245 CTCCAACGTTATCGTTTTGCCAGTCA 8270 >seq64 Length=29840 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | |||||| || || | | ||||| ||||| |||||||| || Sbjct 4667 GCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGC 4726 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | | ||| || | ||||||||||| | | || | ||||| |||||||| || Sbjct 4727 GAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGG 4786 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| |||| | ||| | ||| || | ||||| | ||||| Sbjct 4787 GATGCCCTCCTTGTC-TTGAATTTTCGCTTTCACGTTG-TCGATCGTGTCCGAAGACTCG 4844 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 || |||| || | ||||| || |||| |||||| Sbjct 4845 ACTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496249261452960