Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq64 131 2e-25 seq277 109 5e-19 >seq64 Length=29840 Score = 131 bits (144), Expect = 2e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| ||| || || |||||||| || ||||| || ||| | Sbjct 4680 CTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCG 4739 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | |||||||| |||||||||||||| ||||| || || Sbjct 4740 TCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 4799 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| ||| | || | || | ||||| |||||||||||||||||||| | Sbjct 4800 TCTTGAATTTTCGCTTTCA-CGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGAT 4858 Query 45305 CGTTTTGCCGGTTAGAGTTTT 45325 ||||| || || | |||||| Sbjct 4859 GGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 109 bits (120), Expect = 5e-19 Identities = 142/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAAT 45186 || ||||| |||||||| |||||||||||||| || ||||| || ||| || | Sbjct 8080 CAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAACG-TTCGCCCGT 8138 Query 45187 CGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTAT 45246 | |||||||| || || ||| ||||||| || || |||||||| || || |||||||| | Sbjct 8139 CTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTTGT 8198 Query 45247 CTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||| || || |||| || | || | || ||||||||||| || || | || | | Sbjct 8199 CTTGGATCTTCGCCTTGA-CGTTATCGATCGTATCGGAAGACTCCACCTCCAACGTTATC 8257 Query 45306 GTTTTGCCGGT 45316 |||||||| || Sbjct 8258 GTTTTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451991233215280