Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq64 105 8e-18 seq277 102 9e-17 >seq64 Length=29840 Score = 105 bits (116), Expect = 8e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| ||||| || | ||| |||| ||||| || ||| |||||||| ||||| || | Sbjct 4667 GCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGC 4726 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||| | | |||| || | || || ||||| || ||||| ||||||||||| | ||| Sbjct 4727 GAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGG 4786 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 46544 | || |||||||| | ||| || ||| ||| | | | |||||| || || | Sbjct 4787 GATGCCCTCCTTGT-CTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGA 4845 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | || | ||||||||||| ||||||| |||||| Sbjct 4846 CTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTTA 4880 >seq277 Length=9178 Score = 102 bits (112), Expect = 9e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| |||| ||||||| ||| | |||| || ||||||||||| ||||| || | Sbjct 8065 GCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGC 8124 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 | || ||| |||| || | ||||| |||||||||||||| ||||| ||||| | || Sbjct 8125 CAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGG 8184 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | || ||||| ||||||| ||||| | | | ||| ||| || ||||| Sbjct 8185 GATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCAC 8244 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCA 46571 |||| ||| || |||||||| |||| Sbjct 8245 CTCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565223435313360