Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq277 122 9e-23 seq64 107 2e-18 >seq277 Length=9178 Score = 122 bits (134), Expect = 9e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| |||||||| || || ||| | |||||||||||| | || | ||| || || Sbjct 8208 AAGATCCAAGACAAAGAAGGGATCCCCCCGGACCAACAGCGGTTGATATTCGCCGGGAAG 8149 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || |||| |||| ||| || | || |||||||||||||||||| |||||||||| Sbjct 8148 CAATTGGAAGACGGGCGAACGTTGGCGGATTACAACATCCAAAAGGAATCGACGCTGCAC 8089 Query 38448 TTGGTGCTGCGTTTGAGAGGCGGCC 38472 || |||||||||||| ||||||||| Sbjct 8088 TTAGTGCTGCGTTTGCGAGGCGGCC 8064 >seq64 Length=29840 Score = 107 bits (118), Expect = 2e-18 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AAC 38317 ||||| | ||||| ||||||||||| |||| |||||| | | |||| | | ||| Sbjct 4879 AAAACTTTGACGGGGAAAACCATCACTCTCGAAGTCGAGTCTTCGGACACGATCGACAAC 4820 Query 38318 GCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTT 38376 | | |||| ||||| | ||||| ||||| || ||||||| |||| ||||| | |||| Sbjct 4819 G-TGAAAGCGAAAATTCAAGACAAGGAGGGCAT-CCCGCCGGACCAGCAGCGATTGATTT 4762 Query 38377 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAG 38436 || || ||||| | || |||| | | || ||| || |||||||||||||| || Sbjct 4761 TTGCCGGTAAACAATTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAGT 4702 Query 38437 CGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | ||| |||| ||||| || | |||||||| ||| Sbjct 4701 CCACGTTGCACTTGGTTTTGAGATTGAGAGGTGGC 4667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500159557925120