Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq64 158 3e-33 seq277 107 4e-18 >seq64 Length=29840 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| | |||||||||||||| || |||||||| || ||||| Sbjct 4673 TCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGT 4732 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 |||||| ||||| | || ||||| || || || | ||| || ||||| || || ||||| Sbjct 4733 TCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCC 4792 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||||||||| || ||||| || || ||||||||| || ||||| || Sbjct 4793 CTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAG 4852 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTT 195125 || | || || || ||||||||||| Sbjct 4853 AGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || || ||||| || |||||||| || | |||| ||| ||||| | || Sbjct 8089 GTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAACGTTCGCCCGTCTTCCAATTG 8148 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || |||||||| || || || |||||||||||||| || || Sbjct 8149 CTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTTGTCTTGGATCTT 8208 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || || || ||| ||||| || | || | ||| || || || Sbjct 8209 CGCCTTGACGTTATCGATCGTATCGGAAGACTCCACCTCCAACGTTATCGTTTTGCCAGT 8268 Query 195117 CA 195118 || Sbjct 8269 CA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109451492136506