Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq64 107 1e-18 seq277 93.3 3e-14 >seq64 Length=29840 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || || | | ||| ||||| || | |||| ||||||||| || |||||||| | Sbjct 4666 CGCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCG 4725 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| ||| |||| || || || ||||||||||| |||| |||||| || |||| | Sbjct 4726 CGAGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCG 4785 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||| || ||| || | | | || || | ||| | Sbjct 4786 GGATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGA 4845 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTT 48751 | || | || || ||||| |||||||||||||| Sbjct 4846 CTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48536 GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATC 48595 || |||||| | | |||| ||| || || ||||| || ||||| || |||||||| Sbjct 8062 GTGGCCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATC 8121 Query 48596 AGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGT 48655 | | |||| |||| ||||| ||||| ||||| ||||||| |||||||| |||| Sbjct 8122 CGCCAACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGG 8181 Query 48656 GGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTC 48715 ||| | || || ||||| ||||| || || | | | | || || | ||| Sbjct 8182 GGGGATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTC 8241 Query 48716 CACCTCCACCGTAATCGTTTTTCCCGTCA 48744 |||||||| ||| |||||||| || |||| Sbjct 8242 CACCTCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380927766810114