Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 >seq1 Length=110906 Score = 104 bits (114), Expect = 5e-17 Identities = 185/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 150398 TTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATC 150457 || ||||||||||| || ||||||||| | ||||| ||| || || || |||| ||| Sbjct 85218 TTGGTTGGTGAACCCGGGGTTGGTAAATCTGCAATCGCTGAAGGTTTGGCGCAACAAATC 85277 Query 150458 GCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGA-AATTCTTTCTTTGAATATGGG 150516 || ||| |||||| || || || | | | || ||| | ||||| ||||||| Sbjct 85278 GCAGCGGGTTCTGTTCCGGAAACTTTGGATGG-GAAGAGAATGATGACTTTGGATATGGG 85336 Query 150517 TGCATTTACT----GCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATT 150572 | || || || ||||| ||||||||||| ||||||||||||||| | | || Sbjct 85337 T----TTGCTCGTCGCGGGTACCAAGTATCGTGGGGAATTCGAAGAACGTTTGAAGAAAC 85392 Query 150573 TGCTACAAGAACTAAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTA 150632 | | | ||| | || || ||| || ||||||| |||||||| || | |||||| Sbjct 85393 TCATGGACGAAGTCAAGCAAGACGAAGACATTATTCTTTTCATCGACGAGGTACATACTT 85452 Query 150633 TTATGGGTGCTGGTGCGACTGGCGGCG 150659 | || || || || ||| ||| |||| Sbjct 85453 TGATTGGCGCCGGGGCGGCTGAAGGCG 85479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147559257982764