Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 2e-15 >seq11 Length=57886 Score = 96.9 bits (106), Expect = 2e-15 Identities = 170/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 25916 TTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTC 25975 |||| || ||| | | ||| || ||||| |||||| | ||||| || || | Sbjct 12000 TTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAGCCGTAAAACAAGTCACGA 12059 Query 25976 GCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAG 26035 ||||| |||||| || ||||| |||||| | | ||| | | || || || || ||| Sbjct 12060 GCTCTAGCTTCTTCCTTGCCGTGGTTCTTTCTCAAATCGAGCCAGTCGAAGATGTCCGAG 12119 Query 26036 TGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACG 26095 ||||||||||| | |||||| |||||| || || | || || || ||||| || || Sbjct 12120 TGCCATGGTTCGAGATAGATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACA 12179 Query 26096 TATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTT-GAAAATCCGTT 26154 || || || || || ||||| || | ||| |||| |||| | ||| ||| ||||| Sbjct 12180 TACCTCGCTGTGTCGTTGAACACCCGAAGCATCGGAA-TAATACCGTTCGAAGTACCGTT 12238 Query 26155 TGTGC 26159 ||||| Sbjct 12239 TGTGC 12243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253033468246850