Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq64 114 2e-20 >seq64 Length=29840 Score = 114 bits (126), Expect = 2e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || || || || || || || | |||||| || || ||||| | Sbjct 4668 CCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCG 4727 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || |||| || ||||||||||| |||||||| |||| ||| ||||| || || Sbjct 4728 AGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGG 4787 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || || || || ||||| ||||| ||| || || || || || || || || ||| Sbjct 4788 ATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGACT 4847 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATG 172058 || ||||| |||||||| || || || |||||| || Sbjct 4848 TCGAGAGTGATGGTTTTCCCCGTCAAAGTTTTACTG 4883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905112036524400