Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 118 1e-21 seq64 84.2 2e-11 >seq11 Length=57886 Score = 118 bits (130), Expect = 1e-21 Identities = 466/722 (65%), Gaps = 21/722 (3%) Strand=Plus/Plus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 ||||| || || | ||||| ||||| || || || || | |||| || |||||||| Sbjct 11685 GCGATGGATGCCAAGTTGCAAACGGCGGTTTCTTCTGGTGAAGTGTATTCGACGATCTCT 11744 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | |||| ||| |||||||| ||| | || | ||| || ||||| ||||||| Sbjct 11745 GTACACAAGTTGGACGATTTGATCGTGCCTAAATTTTGTTGGTTTGACTTGCGGTTGCAC 11804 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAAC 148997 || ||||| ||| |||||| || |||||||||||| |||| ||| | || ||| Sbjct 11805 GCATCCTTAAACAACATGTATGGGTTGCCAGTTTCCACTTGCGCTTCGAGAATAGCAAAC 11864 Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCTGCT---CGTAGCGACCCTCCTGCTCGTATAAA 149054 | | || | ||| || | | || || | | | ||| | ||||| Sbjct 11865 CAA---AGCTGCTGGGCATTAATTGTCTTCTTGCCCTTG-TTTTCTCTT--TCGTACTTG 11918 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 || ||||| ||||| | || || |||| ||| | ||| ||||||| || |||| Sbjct 11919 GTGTACAGAGCTTCGAATTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGG 11978 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 ||||| || | |||| ||||| | | || | ||||| |||| |||| | ||| Sbjct 11979 CACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCAC 12038 Query 149175 AGCGCGTACATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTT 149233 | |||| | | ||| || || || || ||||| ||| ||| | || | Sbjct 12039 AAGCCGTAAAACAAGTCACGAGCTCTAGC-TTCTTCCTTGCCGTGGTTCTTTCTCAAATC 12097 Query 149234 GAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG 149293 |||| | ||| ||||||| |||||| || || | || | || | ||||||||||| Sbjct 12098 GAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAGATGGCAAAAGCGCCCTTGCG 12157 Query 149294 CTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTC 149350 ||| |||||| ||||| || | | | | ||| ||| ||||| |||| ||| || Sbjct 12158 CTTACCGCCGCCTTGGTCCACATACCTCGCTGTGTCGTTGAACACCCGAAGCATCGGAAT 12217 Query 149351 AATGCCACTGGCAGTGCCGTTAGTAGAGCT--AATGCGACTGCCGCGCGCTCGCACTTTG 149408 ||| || | | ||| ||||| || || || ||| | || | || || | | | Sbjct 12218 AATACCGTTCGAAGTACCGTTTGTGCCTCTGATATACGA-AGACGTG-GCACGGATGTCG 12275 Query 149409 TGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTC 149468 || | | | ||||| || ||| || |||| || ||| |||||| || | ||| Sbjct 12276 TGAATGGACAAACCGATACCACCGGCGGACTTGGAAATGCACGCGCACTCCTTCAACGTG 12335 Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528 |||||| || || ||| ||| ||||||| | || |||||||||| | | ||| Sbjct 12336 TCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGCTGC 12395 Query 149529 GG 149530 || Sbjct 12396 GG 12397 >seq64 Length=29840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||||||||| || || |||||||| | | || | ||| || | || || || Sbjct 4698 GTGGACTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAATTGTTTACCG 4757 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582 || |||| | ||||||||||| || |||||||| |||||||| ||| ||| || || Sbjct 4758 GCAAAAATCAATCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC-TTGAATTTTCGCTTT 4816 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | | ||| || |||| |||| |||||| || |||| ||| Sbjct 4817 CACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATGGTTTTCCCCGTCAAAGT 4876 Query 133643 TTT 133645 ||| Sbjct 4877 TTT 4879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483408001434320