Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11 109 5e-19 >seq11 Length=57886 Score = 109 bits (120), Expect = 5e-19 Identities = 621/983 (63%), Gaps = 29/983 (3%) Strand=Plus/Plus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTC 147518 ||||| || |||| ||||| ||||| || ||||| || | | |||| | ||||| || Sbjct 11685 GCGATGGATGCCAAGTTGCAAACGGCGGTTTCTTCTGGTGAAG-TGTATTCGACGATCTC 11743 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | |||| |||| |||| || || |||||||| || || || || ||||| Sbjct 11744 TGTACACAAGTTGGACGATTTGATCGTGCCTAAATTTTGTTGGTTTGACTTGCGGTTGCA 11803 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AA 147635 ||| || || || | |||||| || ||| || || ||||||| ||| | ||| || Sbjct 11804 CGCATCCTTAAACAACATGTATGGGTTGCCAGTTTCCACTTGCGCTTCGAGAATAGCAAA 11863 Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTC------GTA 147689 || | || | ||| || | || | ||||| |||||| ||| Sbjct 11864 CCAAAGCTG---CTGGGCATTAATTGTCTTCTT------GCCCTTGTTTTCTCTTTCGTA 11914 Query 147690 CCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGG-CAAGGCCGGGACACTGAT 147748 | ||||| || || || || || |||| |||| ||| ||||| |||| | Sbjct 11915 CTTGGTGTACAGAGCTTCGAATTCTTCACCCCAGCATTCGGACAAACCCGGG-CACTCGT 11973 Query 147749 GCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCA 147808 ||| |||||||| | |||| || ||| | | || | | ||| |||| ||| | Sbjct 11974 TCGGGCACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCG 12033 Query 147809 CCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCA 147868 ||||| |||| | | || || ||| | || || ||| ||| | ||| Sbjct 12034 TCCACAAGCCGTAAAACAAGTCACGAGCTCTAGCTTCTTCCTTGCCGTGGTTCTTTCTCA 12093 Query 147869 AATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928 ||| ||| | ||||||| | |||||| ||||| | |||| ||| | || || | Sbjct 12094 AATCGAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAGATGGCAAAAGCGCCCT 12153 Query 147929 TACGCTTTCCGCCC---TGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985 | ||||| ||||| ||||| |||| | | | ||| ||| ||||| || | ||| | Sbjct 12154 TGCGCTTACCGCCGCCTTGGTCCACATACCTCGCTGTGTCGTTGAACACCCGAAGCATCG 12213 Query 147986 GTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTT-GCTGCCGCGGGCTCGCACT 148044 | | ||| ||| ||| ||||| ||| |||| | | | || || | || | Sbjct 12214 GAATAATACCGTTCGAAGTACCGTTTGTGCCTCTGATATACGAAGACGTGG-CACGGATG 12272 Query 148045 TCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAAT 148104 ||||| | | | || || || ||| || |||| || ||| ||||| || ||| Sbjct 12273 TCGTGAATGGACAAACCGATACCACCGGCGGACTTGGAAATGCACGCGCACTCCTTCAAC 12332 Query 148105 GTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATT 148164 || |||||| || || ||| ||| | || | || || |||||| ||||| | | Sbjct 12333 GTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGC 12392 Query 148165 TGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGA 148224 ||||| | || || || ||| | ||| || ||| ||||| | | | | | Sbjct 12393 TGCGGTCGAGGTGTACCAGCGTTGAACAAGGTTGGCGACGCATGCGTCATCCAACGCTCA 12452 Query 148225 CTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCG 148284 || |||| | || || |||||||| | |||||| || | ||| || || | | Sbjct 12453 GACAACATGTGGTAGGTTTCAATAGCCTTTTCGATATCCTTCTTGTGGATACCGATGGAT 12512 Query 148285 ACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGAT-CTTGAGAAGATA 148343 || | ||| | |||||||||||| || ||| |||| | | || || | | ||| || Sbjct 12513 ACTCTCATCAACATGTGCTGTGGACGCTCGACAACCTTACCGTCTATGCGCAACAAG-TA 12571 Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGAT 148403 | ||| | |||||| |||||||||| | |||||||| || | ||||| | || Sbjct 12572 TGAGCGTTCCAAAGTTTTGAAACCAAAGTAGTCATAATCAAAGTCACGGTCGTAGACAAT 12631 Query 148404 GGCCGCATCTAGTGTCTCAGCAT 148426 | ||||| | | | || |||| Sbjct 12632 TTCGGCATCAAATCTTTCCGCAT 12654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476598581718480