Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq70 150 3e-30 seq11 113 6e-19 seq563 87.8 3e-11 >seq70 Length=28206 Score = 150 bits (166), Expect = 3e-30 Identities = 379/564 (67%), Gaps = 14/564 (2%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| || |||| | |||| |||||| ||| | |||| | ||||| |||| Sbjct 7192 TGTTCCCGATGAAATACCCGAGGATTTGGGAATATTACAAGAAAG-CGGAGGCGAGCTTT 7134 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGC-CGAC-ACGGTCCACTGGGTGTCGCTGAGCG 1455870 ||||| || |||||| | || | | || ||| || | | ||| | |||||| | Sbjct 7133 TGGACGGCGGAGGAGATTGATTT-GACGTACGATTACAGAG-ATTGGATCACGCTGAATG 7076 Query 1455871 ACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATC 1455930 | |||||| || || |||| ||| || | || ||||| ||| ||| || ||||| Sbjct 7075 AGAACGAGCAACACTTTATCACGCATGTTTTGGCGTTTTT-CGCAGCCTCGGACGGCATT 7017 Query 1455931 GTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTG 1455990 || ||||| || || | || ||||||||| | ||| | || |||||||| | Sbjct 7016 GTCTTGGAGAATTTGTGCGTGAGGTTCATGAAAGAGATTCAAGTTCCCGAGGCACGAGCG 6957 Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050 ||||||| ||| ||| || || ||||| || ||| ||||| || | | || | Sbjct 6956 TTTTACGCGTTTCAGCAAGCGATTGAAAATATTCACAGCGAAACGTATGCTTTGTTGTTA 6897 Query 1456051 GACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTG 1456110 || || ||||| || |||||| | ||||| | | ||| | || || | ||| | Sbjct 6896 GAGACGTACGTGAAAGACCCGATTCAGAAGAGAAATTTGTTTGGAGCGATTCATACGATT 6837 Query 1456111 CCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGAC 1456170 || | |||| || || || || ||||||||||| ||||| | ||||| | Sbjct 6836 CCAACCGTGAAAAAGAAAGCGGATTGGGCGATGAAATGGATTGA----ATCCCCCTCGGC 6781 Query 1456171 --ACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227 || ||||| || | ||||| || || |||| || || || |||||| ||||| Sbjct 6780 GAGGTTCGCCGAACGTTTAGTCGGGTTCGCGTGCGTGGAAGGGATTTTTTTCAGCGGCAG 6721 Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287 ||||||||||||||||||| | |||||| | || | ||| || ||| ||| | Sbjct 6720 TTTCTGCGCCATCTTTTGGTTAAAGAAGAGAGGGTTGATGAAAGG-CTTGACATTTTCTA 6662 Query 1456288 ACGAATTTATCAGTCGCGACGAAG 1456311 |||| || |||||||||||||||| Sbjct 6661 ACGAGTTGATCAGTCGCGACGAAG 6638 >seq11 Length=57886 Score = 113 bits (124), Expect = 6e-19 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||||| |||||||||||||| |||||| ||| || ||||| |||||| | ||| || Sbjct 12169 GGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATCTATCTCGAACCATGGCACTCGGACATC 12110 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||||||| || | | ||||||||||||||| || |||| | | || || Sbjct 12109 TTCGACTGGCTCGATTTGAGAAAGAACCACGGCAA------GGAAGAAGCTAGAGCTCGT 12056 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATG 261946 || | ||||||||| |||||||| ||| |||| ||| Sbjct 12055 GACTTGTTTTACGGCTTGTGGACGAACGATTTGTTCATG 12017 >seq563 Length=4372 Score = 87.8 bits (96), Expect = 3e-11 Identities = 162/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| | ||||| |||||||| |||| |||| ||| |||| | Sbjct 3511 ATCTACAAGGTCTTGAAGCAAGTGCACCCGGACACCGG-----CATC-TCCTCCAAGGCG 3458 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || |||||||||| |||| |||| || || |||| Sbjct 3457 ATGAGCATCATGAACTCCTTCATCAACGACATCTTCGAAAAGATCGCGACAGAAGCCGCC 3398 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGC---GCGAGATCCAGACCGCC 725087 |||| | | ||||||| || ||| || ||| | || ||||| || || Sbjct 3397 AAGTTGGCCAGATACAACAAG---AAGCCGACCGTGACGTCTAGAGAAATCCAAACGTCC 3341 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||||| ||| |||||| |||||| |||||||||||||| || |||| Sbjct 3340 GTTCGATTGATCTTGCCGGGCGAATTGGCCAAACACGCCGTCTCCGAAGGGACCA 3286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177606915007116