Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq64 129 5e-25 seq277 118 1e-21 >seq64 Length=29840 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| ||||| || ||||| ||| ||||| ||||||||||| || Sbjct 4668 CCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCG 4727 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | |||| || | || ||||| ||||| ||||| ||||||||||||| || Sbjct 4728 AGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGG 4787 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| | ||| ||| |||| |||| | | |||||| || || || Sbjct 4788 ATGCCCTCCTTGT-CTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGAC 4846 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 || | ||||| ||||| |||||||||||||| Sbjct 4847 TTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq277 Length=9178 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || || | || ||| || || | ||| |||||||| ||||||||||| ||| Sbjct 8066 CCGCCTCGCAAACGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 8125 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||||| |||| |||| ||||| || || |||||||||||||| ||||||| || Sbjct 8126 AACGTTCGCCCGTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGG 8185 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| |||||| ||| | | | | ||| ||| || |||||| Sbjct 8186 ATCCCTTCTTTGTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCACC 8245 Query 35690 TCCACCGTGATCGTTTTACCCGTCA 35714 |||| ||| |||||||| || |||| Sbjct 8246 TCCAACGTTATCGTTTTGCCAGTCA 8270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450781665239440