Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq64 132 5e-26 seq277 91.5 1e-13 >seq64 Length=29840 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| | |||||| || ||||| |||||||| || | Sbjct 4668 CCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGCG 4727 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | ||||| || ||||||||||| |||||||| || ||||| Sbjct 4728 AGAGTTCTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCGGG 4787 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||||||||| ||| || ||| | ||||| || || || || Sbjct 4788 ATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGACT 4847 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 |||||||| |||||||| || || ||||||||| Sbjct 4848 TCGAGAGTGATGGTTTTCCCCGTCAAAGTTTTA 4880 >seq277 Length=9178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGA 134557 |||| ||| | ||| ||||| ||||||||||| |||||||| | ||||||| || | Sbjct 8078 CGCAGCACTAAGTGCAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAAC-GTTCGCCC 8136 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || | || || || || || ||||| ||||| || || || || || |||||||| Sbjct 8137 GTCTTCCAATTGCTTCCCGGCGAATATCAACCGCTGTTGGTCCGGGGGGATCCCTTCTTT 8196 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 ||||| || || ||||| || | || ||||| || ||||| || | || || Sbjct 8197 GTCTTGGATCTTCGCCTTGACGTTATCGATCGTATCGGAAGACTCCACCTCCAACGTTAT 8256 Query 134678 GGTTTTACCGGT 134689 ||||| || || Sbjct 8257 CGTTTTGCCAGT 8268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505385019577360