Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq11 136 5e-27 >seq11 Length=57886 Score = 136 bits (150), Expect = 5e-27 Identities = 573/899 (64%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 ||||||||||| | || ||||||| || || | |||||| || || ||| | Sbjct 11739 ATCTCTGTACACAAGTTGGACGATTTGATCGTGCCTAAATTTTGTTGGTTTGACTTGCGG 11798 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATA 69444 || || || ||||| | | || | || | |||||||| | || | ||||| |||| Sbjct 11799 TTGCACGCATCCTTAAACAACATGTATGGGTTGCCAGTTTCCACTTGCGCTTCGAGAATA 11858 Query 69445 GATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTT---TTTCATAT 69501 | ||||| | ||||| ||| ||||| | | ||| | || |||| || Sbjct 11859 GCAAACCAAAGCTGCTGGGCATTAATT---GTCTTCTTGCCCTTGTTTTCTCTTTCGTAC 11915 Query 69502 T--GTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559 | ||||| | ||| ||||||||| || ||||| || ||| || || || || | Sbjct 11916 TTGGTGTACAGAGC--TTCGAATTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGT 11973 Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619 | || ||||||| || |||| | | || | |||| |||||| || | |||| Sbjct 11974 TCGGGCACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCG 12033 Query 69620 TCCAAAGAGCTATAAAGAGA-TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 |||| | ||| |||| | || | | |||| |||||| || || || ||| | Sbjct 12034 TCCACA-AGCCGTAAAACAAGTCACGAGCTCTAGCTTCTTCCTTGCCGTGGTTCTTTCTC 12092 Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 | |||||| | || | || || || ||||||||||| ||||| || || | | ||| Sbjct 12093 AAATCGAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAGATGGCAAAAGCGCCC 12152 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || ||| || || || || | || || || |||| || | || | |||||| Sbjct 12153 TTGCGCTTACCGCCGCCTTGGTCCACATACCTCGCTGTGTCGTTGAACACCCGAAGCATC 12212 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 ||||||||||| || || |||| ||||| || ||||| | || || || Sbjct 12213 GGAATAATACCGTTCGAAGTACCGTTTGTGCCTCTGATATACGAAGACGTGGCACGGATG 12272 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAAT 69918 | ||| || | ||| || || || || || || || || || ||||| Sbjct 12273 TCGTGAATGGACAAACCGATACCACCGGCGGACTTGGAAATGCACGCGCACTCCTTCAAC 12332 Query 69919 GTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATT 69978 ||||| || ||||| || ||| || || ||||| || | ||| || || | Sbjct 12333 GTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGC 12392 Query 69979 TGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCA 70038 || | | || || || || || || || || || || || || | ||| ||| Sbjct 12393 TGCGGTCGAGGTGTACCAGCGTTGAACAAGGTTGGCGACGCATGCGTCATCCAACGCTCA 12452 Query 70039 GAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCG 70098 || | || | ||| ||||||||||| ||| |||||| || || || || || | Sbjct 12453 GACAACATGTGGTAGGTTTCAATAGCCTTTTCGATATCCTTCTTGTGGATACCGATGGAT 12512 Query 70099 ACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTAT 70158 || | ||||||||| ||||| || || || || ||| | ||| ||||| |||| Sbjct 12513 ACTCTCATCAACATGTGCTGTGGACGCTCGACAACCTTACCGTCTATGCGCAACAAGTAT 12572 Query 70159 GATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || ||||| |||||| || ||||| |||| || |||||| | ||||| | ||| Sbjct 12573 GAGCGTTCCAAAGTTTTGAAACCAAAGTAGTCATAATCAAAGTCACGGTCGTAGACAAT 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686890614089520