Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq70 150 1e-31 >seq70 Length=28206 Score = 150 bits (166), Expect = 1e-31 Identities = 366/546 (67%), Gaps = 9/546 (2%) Strand=Plus/Minus Query 43742 TACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA 43801 ||||| ||||| ||||| |||||||| || || || |||||||||| | || | Sbjct 7157 TACAAGAAAGCGGAGGCGAGCTTTTGGACGGCGGAGGAGATTGATTTGACGTACGATTAC 7098 Query 43802 GCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTT 43861 | ||||||| | | || | || |||| ||||| | |||||||||||| Sbjct 7097 AGAGATTGGATCACGCTGAATGAGAACGAGCAACACTTTATCACGCATGTTTTGGCGTTT 7038 Query 43862 TTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC-GGTTTGCGCAAGAAGT 43920 || || || ||||| || ||| || |||||| | || |||| | |||| | Sbjct 7037 TTCGCAGCCTCGGACGGCATTGTCTTGGAGAATTTG-TGCGTGAGGTTCATGAAAGAGAT 6979 Query 43921 TCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTC 43980 |||| | || || |||||| ||||| | |||||| || || ||||||||||| Sbjct 6978 TCAAGTTCCCGAGGCACGAGCGTTTTACGCGTTTCAGCAAGCGATTGAAAATATTCACAG 6919 Query 43981 GGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATT 44040 |||| ||| | | || |||| |||||| | ||||| | ||||| || Sbjct 6918 CGAAACGTATGCTTTGTTGTTAGAGACGTACGTGAAAGACCCGATTCAGAAGAGAAATTT 6859 Query 44041 GTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATG 44100 |||| ||||| | || | || | | ||| | ||||| || ||||| | ||||| Sbjct 6858 GTTTGGAGCGATTCATACGATTCCAACCGTGAAAAAGAAAGCGGATTGGGCGATGAAATG 6799 Query 44101 GATA-AATTCAAAT--GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGG 44157 ||| ||| | | | || | ||||| | |||| ||| || |||||||| Sbjct 6798 GATTGAATCCCCCTCGGCGAGGTTCGCCGAACGTTTAGTCGGGTTCGCGTGCGTGGAAGG 6739 Query 44158 CATTTTCTTTTCAGGATC-GTTTGCG-GCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215 ||||| |||||| | |||| | ||||| |||||||||||||| |||| |||||| Sbjct 6738 GATTTT--TTTCAGCGGCAGTTTCTGCGCCATCTTTTGGTTAAAGAAGAGAGGGTTGATG 6681 Query 44216 CCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTT 44275 || ||||| ||||| || ||||| || ||||| || ||||| |||||||||||||| Sbjct 6680 AAAGGCTTGACATTTTCTAACGAGTTGATCAGTCGCGACGAAGGGTTACATTGCGATTTC 6621 Query 44276 GCTTGC 44281 || ||| Sbjct 6620 GCGTGC 6615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445740418590