Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq64 100 2e-16 seq11 82.4 6e-11 >seq64 Length=29840 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GC 27078 ||| || | ||| | ||| ||||| || ||||| || |||||||| || ||||| || || Sbjct 4667 GCCACCTCTCAATCTCAAAACCAAGTGCAACGTGGACTCTTTTTGGATGTTGTAATCCGC 4726 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | | ||||||| | ||||||||||| |||| | ||||| || ||||||| Sbjct 4727 GAGAGTT-CTCCCGTCTTCTAATTGTTTACCGGCAAAAATCAATCGCTGCTGGTCCGGCG 4785 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || || || ||||| | | || | ||||| | | || | Sbjct 4786 GGATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAAGACTCGA 4845 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTT 27232 |||| ||||| || | ||| ||||||| |||||| Sbjct 4846 CTTCGAGAGTGATGGTTTTCCCCGTCAAAGTTTT 4879 >seq11 Length=57886 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| | || ||||| || | |||| |||||| | ||| |||| ||||| ||| Sbjct 11964 GGGCACTCGTTCGGGCACATCAGTGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAAC 12023 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| | ||| || |||| |||| || | |||| | ||||| | || Sbjct 12024 AAATCGTTCGTCCACAAGCCGTAAAACAAGTCACGAGCTCTAGCTTCTTCCTTGCCGTGG 12083 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | ||| |||||| | |||| || ||||||| ||||| ||||| | ||| | || Sbjct 12084 TTCTTTCTCAAATCGAGCCAGTCGAAGATGTCCGAGTGCCATGGTTCGAGATAGATGGCA 12143 Query 131783 ATTGCGCCTTTGCGCTTACCGCC 131805 | ||||| |||||||||||||| Sbjct 12144 AAAGCGCCCTTGCGCTTACCGCC 12166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923431115216